CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011617
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein-arginine deiminase type-2 
Protein Synonyms/Alias
 Peptidylarginine deiminase II; Protein-arginine deiminase type II 
Gene Name
 Padi2 
Gene Synonyms/Alias
 Pdi; Pdi2 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
183SDEKVYSKQDLQDMSubiquitination[1]
386SPRDGNLKDFPIKQLubiquitination[1]
582IDLPALFKMDENHQAubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Catalyzes the deimination of arginine residues of proteins. 
Sequence Annotation
 MOD_RES 1 1 N-acetylmethionine.
 MOD_RES 352 352 Citrulline.  
Keyword
 Acetylation; Calcium; Citrullination; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 673 AA 
Protein Sequence
MQPPIRENML RERTVRLQYG SRVEAVYVLG TQLWTDVYSA APAGAKTFSL KHSEGVKVEV 60
VRDGEAEEVV TNGKQRWALS PSSTLRLSMA QASTEASSDK VTVNYYEEEG SAPIDQAGLF 120
LTAIEISLDV DADRDGEVEK NNPKKASWTW GPEGQGAILL VNCDRDTPWL PKEDCSDEKV 180
YSKQDLQDMS QMILRTKGPD RLPAGYEIVL YISMSDSDKV GVFYVENPFF GQRYIHILGR 240
QKLYHVVKYT GGSAELLFFV EGLCFPDESF SGLVSIHVSL LEYMAEGIPL TPIFTDTVMF 300
RIAPWIMTPN ILPPVSVFVC CMKDNYLFLK EVKNLVEKTN CELKVCFQYM NRGDRWIQDE 360
IEFGYIEAPH KGFPVVLDSP RDGNLKDFPI KQLLGPDFGY VTREPLFETV TSLDSFGNLE 420
VSPPVTVNGK EYPLGRILIG SSFPLSGGRR MTKVVRDFLQ AQQVQAPVEL YSDWLTVGHV 480
DEFMTFIPIP GKKEFRLLMA STSACYQLFR EKQKAGHGEA VMFKGLGGMS SKRITINKIL 540
SNESLTQENQ YFQRCLDWNR DILKRELALT EKDIIDLPAL FKMDENHQAR AFFPNMVNMI 600
VLDKDLGIPK PFGPQVEEEC CLETHVRGLL EPLGLACTFI DDISAYHKFL GEVHCGTNVR 660
RKPFTFKWWH MVP 673 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0004668; F:protein-arginine deiminase activity; IEA:EC.
 GO:0018101; P:peptidyl-citrulline biosynthetic process from peptidyl-arginine; IEA:InterPro. 
Interpro
 IPR008972; Cupredoxin.
 IPR004303; PAD.
 IPR013530; PAD_C.
 IPR013732; PAD_N.
 IPR013733; Prot_Arg_deaminase_cen_dom.
 IPR016296; Protein-arginine_deiminase_sub. 
Pfam
 PF03068; PAD
 PF08527; PAD_M
 PF08526; PAD_N 
SMART
  
PROSITE
  
PRINTS