CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041716
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Sec23ip 
Protein Synonyms/Alias
 RCG40648, isoform CRA_b 
Gene Name
 Sec23ip 
Gene Synonyms/Alias
 rCG_40648 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
870SRMGSDLKQGFISSLubiquitination[1]
930VESPEFSKDEDYLGKubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 999 AA 
Protein Sequence
MADRKANGGG ASASSSGTNL LFSSSATEFS FNVPFIPVTQ AAASPASLLL PGEDSTDVGE 60
EDSFLGQTST HTSTPQTFSY FSQVSSSSDP FGNIGQSPLA TTAMSAGQSA LPKPPATLPF 120
TTGSQDMLNA FPPSVSKAPY GAAPSSQMGA STYLPSQPSS LPPNFGSPPQ GIPQQGHNPY 180
RHTPVSSRAN PYITPPQLQQ CQTPGHPSYP PPSAPPVQTY QMPPGPLPPL PTAVQSPAQQ 240
QVPARPAGPL VQGPSPFVLQ NQYEPVQPHW FYCKEVEYKQ LWMPFSVLDS LNLEEIYNSV 300
QPDPENVVLG TDGGRYDVYL YDRMRKSVYW EEEPAEVRRC TWFYKGDTDS RFIPYTEEFS 360
EKLEAEYKKA VTTNQWHRRL EFPSGETIVM HNPKVIVQFQ PSSVPDEWGT TQDGQTRPRV 420
VKRGIDDNLD EIPDGEMPQV DHLVFMVHGI GPVCDLRFRS IIECVDDFRV VSLKLLQTHF 480
KKSVDEGKVS RVEFLPVHWH SALGGHATGV DRNIKKITLP SIGRFRHFTN ETLLDVLFYN 540
SPTYCQSIVE KVGVEINRLH SLFMSRNPNF KGKVSVAGHS LGSLILFDIL SNQKDMSISK 600
SPGSVAVSNG VTKHSNFQEK QVSEESKLMS DESCDLDVED EEPLTLHGTL EALSLFDYIS 660
TFEKEKIDME SLLMCTVDDL KEMGIPLGPR KKIANFVKLK AAKLEQKKAA SEKKAALAAL 720
TKGQGESAPK TKEMASPSSE SNESKRKLSV GAYVSSVRVD YESFEVGTGQ VSVAYSSLDF 780
EPEIFFALGS PIGMFLTIRG VDRIDESYRL PTCKGFFNIY HPLDPVAYRL EPMIAPDLDL 840
KAVLIPHHKG RKRLHLELKE SLSRMGSDLK QGFISSLKSA WQTLNEFARA HTSSTQLQEE 900
LEKVANQIKE EEEKQVVEAE KIVESPEFSK DEDYLGKVGM LNGGRRIDYV LQEKPIESFN 960
EYLFALQSHL CYWESEDTAL LLLKEIYRTM NISPEQPQH 999 
Gene Ontology
 GO:0043231; C:intracellular membrane-bounded organelle; IEA:Compara.
 GO:0046872; F:metal ion binding; IEA:InterPro. 
Interpro
 IPR004177; DDHD.
 IPR001660; SAM.
 IPR013761; SAM/pointed.
 IPR021129; SAM_type1. 
Pfam
 PF02862; DDHD
 PF00536; SAM_1 
SMART
 SM00454; SAM 
PROSITE
 PS51043; DDHD 
PRINTS