CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002187
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone H2B-alpha 
Protein Synonyms/Alias
 H2B.1 
Gene Name
 htb1 
Gene Synonyms/Alias
 SPCC622.09 
Created Date
 July 27, 2013 
Organism
 Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) 
NCBI Taxa ID
 284812 
Lysine Modification
Position
Peptide
Type
References
6**MSAAEKKPASKAPacetylation[1]
11AEKKPASKAPAGKAPacetylation[1]
16ASKAPAGKAPRDTMKacetylation[1]
Reference
 [1] Mapping Post-translational Modifications of Histones H2A, H2B and H4 in Schizosaccharomyces pombe.
 Xiong L, Wang Y.
 Int J Mass Spectrom. 2011 Mar 30;301(1-3):159-165. [PMID: 21516229
Functional Description
 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. 
Sequence Annotation
 MOD_RES 6 6 N6-acetyllysine; alternate (By
 MOD_RES 7 7 N6-acetyllysine; alternate (By
 MOD_RES 10 10 Phosphoserine (By similarity).
 MOD_RES 11 11 N6-acetyllysine (By similarity).
 CROSSLNK 6 6 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 7 7 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 120 120 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Isopeptide bond; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 126 AA 
Protein Sequence
MSAAEKKPAS KAPAGKAPRD TMKSADKKRG KNRKETYSSY IYKVLKQVHP DTGISNQAMR 60
ILNSFVNDIF ERIATEASKL AAYNKKSTIS SREIQTAVRL ILPGELAKHA VTEGTKSVTK 120
YSSSAQ 126 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IDA:PomBase.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000558; Histone_H2B. 
Pfam
 PF00125; Histone 
SMART
 SM00427; H2B 
PROSITE
 PS00357; HISTONE_H2B 
PRINTS
 PR00621; HISTONEH2B.