CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011846
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable 2-methylcitrate dehydratase 
Protein Synonyms/Alias
  
Gene Name
 PDH1 
Gene Synonyms/Alias
 YPR002W; LPZ2W; YP9723.02 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
46KVLKDIAKYVHETPLacetylation[1]
488HFVESPDKVDLIMKVacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Catalyzes the dehydration of 2-methylcitrate to 2- methyl-cis-aconitate (By similarity). 
Sequence Annotation
  
Keyword
 2Fe-2S; Complete proteome; Iron; Iron-sulfur; Lyase; Metal-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 516 AA 
Protein Sequence
MFLAKNLKNN KIKVCLPKKK FAALSTASIQ TNERPNPDKV LKDIAKYVHE TPLKSSLALD 60
TARLCFLDTL GCGLAALKFK QAQNIIKPIV PGTIVPSGTK ILGTSYVMDP VKGAFAIGTL 120
IRWLDYNDCW LAAEWGHPSD NLGGILAVAD HLSRLNKATH GKNGKQFLVK DVLEAMIKAH 180
EIQGIIALEN SFNKVGLDHV VLVKVATAGV VSKMLGLSQE QTIEALSQAF VDGQSLRTYR 240
HAPNTGSRKS WAAGDAVSRA VNLAYLVKNA NVGTIPSVLT ARTWGFYDVL FKGKPFSFQQ 300
RSKYDSYVME NVLFKISFPA EFHAQTAVEA AVKAYRILAK QGKTFKDIKS IRIRTQEAAM 360
RIIDKSGPLY NYADRDHCIQ YMIAVPLITG NLTATDYSDE VARNPEIDNL RSKMYCIEDT 420
HLTQNYHDPD KRSIGNALLI ELNDGTQLDE IFVEYPVGHK FRREEGIPLL MNKFQRHLRE 480
HFVESPDKVD LIMKVSSKTN FLNMQIDKYM DLFTEG 516 
Gene Ontology
 GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
 GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0047547; F:2-methylcitrate dehydratase activity; ISA:SGD.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0019629; P:propionate catabolic process, 2-methylcitrate cycle; ISA:SGD. 
Interpro
 IPR012705; 2Me_IsoCit_deHydtase_PrpD.
 IPR005656; MmgE_PrpD. 
Pfam
 PF03972; MmgE_PrpD 
SMART
  
PROSITE
  
PRINTS