CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002327
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Delta-aminolevulinic acid dehydratase 
Protein Synonyms/Alias
 ALADH; Porphobilinogen synthase 
Gene Name
 Alad 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
87GVPSRVPKDEQGSAAacetylation[1]
87GVPSRVPKDEQGSAAubiquitination[2]
184AIKAALLKHGLGNRVacetylation[1]
252GADILMVKPGLPYLDacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
 Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). 
Sequence Annotation
 ACT_SITE 199 199 Schiff-base intermediate with substrate
 ACT_SITE 252 252 Schiff-base intermediate with substrate
 METAL 122 122 Zinc 1; catalytic (By similarity).
 METAL 124 124 Zinc 1; catalytic (By similarity).
 METAL 131 131 Zinc 2 (By similarity).
 METAL 132 132 Zinc 1; catalytic (By similarity).
 METAL 223 223 Zinc 2 (By similarity).
 BINDING 209 209 Substrate 1 (By similarity).
 BINDING 221 221 Substrate 1 (By similarity).
 BINDING 279 279 Substrate 2 (By similarity).
 BINDING 318 318 Substrate 2 (By similarity).  
Keyword
 Allosteric enzyme; Complete proteome; Direct protein sequencing; Heme biosynthesis; Lyase; Metal-binding; Porphyrin biosynthesis; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 330 AA 
Protein Sequence
MHHQSVLHSG YFHPLLRAWQ TTPSTVSATN LIYPIFVTDV PDDVQPIASL PGVARYGVNQ 60
LEEMLRPLVE AGLRCVLIFG VPSRVPKDEQ GSAADSEDSP TIEAVRLLRK TFPTLLVACD 120
VCLCPYTSHG HCGLLSENGA FLAEESRQRL AEVALAYAKA GCQVVAPSDM MDGRVEAIKA 180
ALLKHGLGNR VSVMSYSAKF ASCFYGPFRD AAQSSPAFGD RRCYQLPPGA RGLALRAVAR 240
DIQEGADILM VKPGLPYLDM VQEVKDKHPE LPLAVYQVSG EFAMLWHGAK AGAFDLRTAV 300
LESMTAFRRA GADIIITYFA PQLLKWLKEE 330 
Gene Ontology
 GO:0005829; C:cytosol; IDA:RGD.
 GO:0005615; C:extracellular space; IDA:RGD.
 GO:0032791; F:lead ion binding; ISS:UniProtKB.
 GO:0004655; F:porphobilinogen synthase activity; ISS:UniProtKB.
 GO:0008270; F:zinc ion binding; ISS:UniProtKB.
 GO:0071284; P:cellular response to lead ion; IEP:RGD.
 GO:0006783; P:heme biosynthetic process; ISS:UniProtKB.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0014823; P:response to activity; IEP:RGD.
 GO:0010044; P:response to aluminum ion; IEP:RGD.
 GO:0043200; P:response to amino acid stimulus; IEP:RGD.
 GO:0046685; P:response to arsenic-containing substance; IDA:RGD.
 GO:0046686; P:response to cadmium ion; IDA:RGD.
 GO:0032025; P:response to cobalt ion; IEP:RGD.
 GO:0042493; P:response to drug; IDA:RGD.
 GO:0045471; P:response to ethanol; IDA:RGD.
 GO:0070542; P:response to fatty acid; IEP:RGD.
 GO:0051384; P:response to glucocorticoid stimulus; IEP:RGD.
 GO:0009635; P:response to herbicide; IEP:RGD.
 GO:0001666; P:response to hypoxia; IEP:RGD.
 GO:0010212; P:response to ionizing radiation; IEP:RGD.
 GO:0010039; P:response to iron ion; IEP:RGD.
 GO:0032496; P:response to lipopolysaccharide; IEP:RGD.
 GO:0046689; P:response to mercury ion; IEP:RGD.
 GO:0051597; P:response to methylmercury; IEP:RGD.
 GO:0006979; P:response to oxidative stress; IEP:RGD.
 GO:0070541; P:response to platinum ion; IEP:RGD.
 GO:0010269; P:response to selenium ion; IEP:RGD.
 GO:0010266; P:response to vitamin B1; IEP:RGD.
 GO:0033197; P:response to vitamin E; IEP:RGD.
 GO:0010043; P:response to zinc ion; IDA:RGD. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR001731; Porphobilinogen_synth. 
Pfam
 PF00490; ALAD 
SMART
 SM01004; ALAD 
PROSITE
 PS00169; D_ALA_DEHYDRATASE 
PRINTS
 PR00144; DALDHYDRTASE.