CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042049
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Trinucleotide repeat-containing gene 6A protein 
Protein Synonyms/Alias
  
Gene Name
 TNRC6A 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
219PPGLTGQKPPLSTWDubiquitination[1]
264ITNWLVLKNLTPQIDubiquitination[1]
304ALVRYSSKEEVVKAQubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 440 AA 
Protein Sequence
MDMNSIKEPQ SRLRKWTTVD SISVNTSLDQ NSSKHGAISS GFRLEESPFV PYDFMNSSTS 60
PASPPGSIGD GWPRAKSPNG SSSVNWPPEF RPGEPWKGYP NIDPETDPYV TPGSVINNLS 120
INTVREVDHL RDRNSGSSSS LNTTLPSTSA WSSIRASNYN VPLSSTAQST SARNSDSKLT 180
WSPGSVTNTS LAHELWKVPL PPKNITAPSR PPPGLTGQKP PLSTWDNSPL RIGGGWGNSD 240
ARYTPGSSWG ESSSGRITNW LVLKNLTPQI DGSTLRTLCM QHGPLITFHL NLPHGNALVR 300
YSSKEEVVKA QKSLHMCVLG NTTILAEFAS EEEISRFFAQ SQSLTPSPGW QSLGSSQSRL 360
GSLDCSHSFS SRTDLNHWNG AGLSGTNCGD LHGTSLWGTP HYSTSLWGPP SSSDPRGISS 420
PSPINAFLSV DHLGGGGESM 440 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0009267; P:cellular response to starvation; IEA:Compara.
 GO:0031047; P:gene silencing by RNA; IEA:InterPro. 
Interpro
 IPR026804; GW182_fam.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
  
SMART
 SM00360; RRM 
PROSITE
  
PRINTS