CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038969
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA-binding protein SMUBP-2 
Protein Synonyms/Alias
  
Gene Name
 Ighmbp2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
148DVTYKRLKKALLTLKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Metal-binding; Nucleotide-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 988 AA 
Protein Sequence
MDSSTVESFV AQQLQLLELE RDAEVEERRS WQEHSSLKEL QSRGVCLLKL QVSGQRTGLY 60
GQRLVTFEPR KFGPAVVLPS NSFTSGDIVG LYDTNESSQL ATGVLTRITQ KSVIVAFDES 120
HDFQLNLDRE NTYRLLKLAN DVTYKRLKKA LLTLKKYHSG PASSLIDVLL GGSTPSPATE 180
IPPLTFYNTT LDPSQKEAVS FALAQKEVAI IHGPPGTGKT TTVVEIILQA VKQGLKVLCC 240
APSNIAVDNL VERLALCKKQ ILRLGHPARL LESVQQHSLD AVLARSDNAQ IVADIRRDID 300
QVFGKNKKTQ DKREKSNFRN EIKLLRKELK EREEAAIVQS LSAADVVLAT NTGASTDGPL 360
KLLPEDYFDV VVVDECAQAL EASCWIPLLK APKCILAGDH KQLPPTTVSH KAALAGLSRS 420
LMERLAEKHG AAVVRMLAVQ YRMHQAITRW ASEAMYHGQL TAHPSVAGHL LKDLPGVADT 480
EETSVPLLLI DTAGCGLLEL EEEDSQSKGN PGEVRLVTLH IQALVDAGVQ AGDIAVIAPY 540
NLQVDLLRQS LSNKHPELEI KSVDGFQGRE KEAVILTFVR SNRKGEVGFL AEDRRINVAV 600
TRARRHVAVI CDSHTVNNHA FLKTLVDYFT EHGEVRTAFE YLDDIVPENY THEGSRSHSC 660
APKPKCPTTS VRKPASAQES RQEARAATGH SRRKPSEKPL GSQVQPQHSS KANGSDRTGG 720
TDRTEHFRAM IEEFVASKEA QLEFPTSLSS HDRLRVHQLA EEFGLKHDST GEGKARHITV 780
SRRSPAGSGS ATPQPPSPPS PAQAEPEPQV EQPVGQPHGS TQLDLKALHL ERLQRQQGCQ 840
AQSQLGGGSR PQKAPQKKKK KEPKGPAMAL PSEEDFDALV SAVVKADNTC SFTKCSASTT 900
TLGQFCMHCS RRYCLSHHLP EIHGCGEKAR AHARQRISRE GVLYAGSGTK DRALDPAKRA 960
QLQRKLDKKL GELSSQRTSK KKEKERGT 988 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0032797; C:SMN complex; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IEA:Compara.
 GO:0032575; F:ATP-dependent 5'-3' RNA helicase activity; IEA:Compara.
 GO:0003677; F:DNA binding; IEA:Compara.
 GO:0043022; F:ribosome binding; IEA:Compara.
 GO:0000049; F:tRNA binding; IEA:Compara.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0051260; P:protein homooligomerization; IEA:Compara. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR004483; DNA_helicase_put.
 IPR014001; Helicase_ATP-bd.
 IPR027417; P-loop_NTPase.
 IPR001374; R3H_ss-bd.
 IPR026853; SMUBP-2.
 IPR000058; Znf_AN1. 
Pfam
 PF01424; R3H
 PF01428; zf-AN1 
SMART
 SM00382; AAA
 SM00487; DEXDc
 SM00393; R3H
 SM00154; ZnF_AN1 
PROSITE
 PS51061; R3H
 PS51039; ZF_AN1 
PRINTS