CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039050
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Kdm4c 
Protein Synonyms/Alias
  
Gene Name
 Kdm4c 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
515KIIEGQPKTTKSWRHacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1003 AA 
Protein Sequence
VIPPKEWKPR QCYDDIDNLL IPAPIQQMVT GQSGLFTQYN IQKKPMTVKE FRQLANSSKY 60
CTPRYLDYED LERKYWKNLT FVAPIYGADI NGSIYDEGVD EWNIARLNTV LDVVEEECGI 120
SIEGVNTPYL YFGMWKTTFA WHTEDMDLYS INYLHFGEPK SWYAIPPEHG KRLERLAQGF 180
FPSSSQGCDA FLRHKMTLIS PSVLKKYGIP FDKITQEAGE FMITFPYGYH AGFNHGFNCA 240
ESTNFATVRW IDYGKVAKLC TCRNDMVKIS MDIFVKKFQP DRYQIWKQGK DIYTIDHTKP 300
TPESTPEVKT WLQRRKKLRK APKSLQGNKS LSKRPKAEED EEFAEFIGEE VSSPAVCPRH 360
LKVTEKPEKF KLANIGASSE KEASDTRIQV DQSLTNDTKL SGKSCINSSV IDEIQPENDT 420
ANAVTSPSTL KKASDLIPFS HGHITGKESR LLKILQLESP KIPSSLAESN RVLTEGEEND 480
EEGHASNLEP GEVPDALSEE RNGLNVPKII EGQPKTTKSW RHPLGKPPAR SPMTLVKQQV 540
ASDEELPEVL SIDEEVEETE SWAKPLIHLW QTKSPNFMAE QEYNATVAKM EPNCAICTLL 600
MPYYKPDNSK EENDSRWETA VNEVVQSGRK TKPIIPEMCF IYSEENVEYS PPNAFLEEDG 660
TSLLISCSKC FVRVHASCYG VPSHEVCDGW LCARCKRNAW TAECCLCNLR GGALKQTKNN 720
QWAHVICAVA VPEVRFTNVP ERTQIDVDRI PLQRLKLKCI FCRQRVKRVS GACIQCSYGR 780
CPASFHVTCA HAAGVLMEPD DWPYVVNITC FRHRVNSNSK TCEKAISVGQ TVITKHRNTR 840
YYSCRVIDVT SQIFYEVMFD DGSFSRDTFP EDIVSRNCVK LGPPAEGEVI QVKWPDGKLY 900
GAKYLGSNVA YMYQVEFEDG SQIAMKREDI YTLDEELPKR VKARFSTASD MRFEDTFYGA 960
DVIQGERKRQ RVLSSRLKNE YVDDPVYRTF LKSSFQKKCQ KRQ 1003 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR003347; JmjC_dom.
 IPR002999; Tudor.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF02373; JmjC 
SMART
 SM00558; JmjC
 SM00249; PHD
 SM00333; TUDOR 
PROSITE
 PS51184; JMJC 
PRINTS