CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018520
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA-binding protein 47 
Protein Synonyms/Alias
 RNA-binding motif protein 47 
Gene Name
 Rbm47 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
264TTEETIKKSFGQFNPubiquitination[1]
376PNRDYFVKTGSIRGRubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
 DOMAIN 71 149 RRM 1.
 DOMAIN 151 233 RRM 2.
 DOMAIN 246 318 RRM 3.  
Keyword
 Alternative splicing; Complete proteome; Nucleus; Reference proteome; Repeat; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 590 AA 
Protein Sequence
MTAEDSATAM NSDPTVGSST KVPEGVAGAP NEAALLALIE RTGYTMVQEN GQRKYGGPPP 60
GWEGPHPQRG CEVFVGKIPR DVYEDELVPV FETVGRIYEL RLMMDFDGKN RGYAFVMYCH 120
KHEAKRAVRE LNNYEIRPGR LLGVCCSVDN CRLFIGGIPK MKKRGEILEE IAKVTEGVLN 180
VIVYASAADK MKNRGFAFVE YESHRAAAMA RRKLMPGRIQ LWGHQIAVDW AEPEIDVDED 240
VMQTVKILYV RNLMIETTEE TIKKSFGQFN PGCVERVKKI RDYAFVHFTS REDAVHAMNN 300
LNGTELEGSC LEVTLAKPVD KEQYSRYQKA AKGGGGSAEA VAQQPSYVYS CDPYTLAYYG 360
YPYNALIGPN RDYFVKTGSI RGRGRGAAGN RTPGPRGSYL GGYSAGRGIY SRYHEGKGKQ 420
QEKGYELVPN LEISPVNPVA IKPGTVAIPA IGAQYSMFQA APAPKIIEDG KIHTMEHMIS 480
PIAVQPDPAT AAAAAAAAAA AAVIPAVSTP PPFQGRPITP VYTVAPNVQR IPTAGIYGAS 540
YVPFAAPATA TIATLQKNAA AAVYGGYAGY IPQAFPAALQ VPIHDVYQTY 590 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW. 
Interpro
 IPR006535; HnRNP_R/Q_splicing_fac.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS