CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030785
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DnaJ homolog subfamily C member 11 
Protein Synonyms/Alias
 cDNA FLJ53979, highly similar to DnaJ homolog subfamily C member 11 
Gene Name
 DNAJC11 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
116LRRVTSAKGWGELEFubiquitination[1]
319AMHRLIIKPYLRAQKubiquitination[2, 3, 4]
344AATDVLQKKQEAESAubiquitination[3]
345ATDVLQKKQEAESAVubiquitination[3]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 469 AA 
Protein Sequence
MKVVERRRTP AEIREEFERL QREREERRLQ QRTNPKGTIS VGVDATDLFD RYDEEYEDVS 60
GSSFPQIEIN KMHISQSIEA PLTATDTAIL SGSLSTQNGN GGGSINFALR RVTSAKGWGE 120
LEFGAGDLQG PLFGLKLFRN LTPRCFVTTN CALQFSSRGI RPGLTTVLAR NLDKNTVGYL 180
QWRWGIQSAM NTSIVRDTKT SHFTVALQLG IPHSFALISY QHKFQDDDQT RVKGSLKAGF 240
FGTVVEYGAE RKISRHSVLG AAVSVGVPQG VSLKVKLNRA SQTYFFPIHL TDQLLPSAMF 300
YATVGPLVVY FAMHRLIIKP YLRAQKEKEL EKQRESAATD VLQKKQEAES AVRLMQESVR 360
RIIEAEESRM GLIIVNAWYG KFVNDKSRKS EKVKVIDVTV PLQCLVKDSK LILTEASKAG 420
LPGFYDPCVG EEKNLKVLYQ FRGVLHQVMV LDSEALRIPK QSHRIDTDG 469 
Gene Ontology
  
Interpro
 IPR024586; DnaJ-like_C11_C. 
Pfam
 PF11875; DUF3395 
SMART
  
PROSITE
  
PRINTS