CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021017
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Regulator of microtubule dynamics protein 1 
Protein Synonyms/Alias
 RMD-1; mRMD-1; Microtubule-associated protein; Protein FAM82B 
Gene Name
 Rmdn1 
Gene Synonyms/Alias
 Fam82b 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
225WYQRRIAKVLFANPPubiquitination[1]
245EALRYFHKAEEVDPNacetylation[2, 3]
245EALRYFHKAEEVDPNsuccinylation[3]
272YLKLNNKKLAAFWLVubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
  
Sequence Annotation
 REPEAT 163 199 TPR 1.
 REPEAT 217 253 TPR 2.  
Keyword
 Complete proteome; Cytoplasm; Cytoskeleton; Microtubule; Reference proteome; Repeat; TPR repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 305 AA 
Protein Sequence
MALSSRLWRR LPPLRVCQQT RTWGSRGRCG AWGVRACEVI GNTRPFKRGF LFSALSYLGF 60
ETYQIISQAA VVHATAKVEE ILAQADYLYE SGETEKLYQL LIQYKESEDG ELLWRLARAS 120
RDIAQLSKTS EEEKKVLVYE ALDYAKRALE KKESSSAAHK WYAICISDVG DYEGIKVKIA 180
NAYVIKEHFE KAIELNPKDA TSIHLMGIWC YTFAEMPWYQ RRIAKVLFAN PPSSTYEEAL 240
RYFHKAEEVD PNFYSKNLLL LGKTYLKLNN KKLAAFWLVK AKGYPAHTEE DKQIQTEAAQ 300
LLTGL 305 
Gene Ontology
 GO:0005813; C:centrosome; IEA:Compara.
 GO:0005874; C:microtubule; IEA:UniProtKB-KW.
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell. 
Interpro
 IPR001440; TPR-1.
 IPR011990; TPR-like_helical. 
Pfam
 PF00515; TPR_1 
SMART
  
PROSITE
 PS50005; TPR
 PS50293; TPR_REGION 
PRINTS