CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033174
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 E3 ubiquitin-protein ligase RNF8 
Protein Synonyms/Alias
  
Gene Name
 RNF8 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
23QWTIMDNKSLNGVWLubiquitination[1]
135QPVKSQGKGEVASTPubiquitination[1]
157LTALEPSKTTGAPIYubiquitination[1]
178TEVHHEQKASNSSASubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 205 AA 
Protein Sequence
MISRNHCVLK QNPEGQWTIM DNKSLNGVWL NRARLEPLRV YSIHQGDYIQ LGVPLENKEN 60
AEYEYEVTEE DWETIYPCLS PKNDQMIEKN KELRTKRKFS LDELAGPGAE GPSNLKSKIN 120
KVSCESGQPV KSQGKGEVAS TPSDNLDPKL TALEPSKTTG APIYPGFPKV TEVHHEQKAS 180
NSSASQRSLQ MFKVTMSRIL RLKIQ 205 
Gene Ontology
 GO:0000781; C:chromosome, telomeric region; IEA:Compara.
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0004842; F:ubiquitin-protein ligase activity; IEA:Compara.
 GO:0051301; P:cell division; IEA:InterPro.
 GO:0006303; P:double-strand break repair via nonhomologous end joining; IEA:Compara.
 GO:0043486; P:histone exchange; IEA:Compara.
 GO:0033522; P:histone H2A ubiquitination; IEA:Compara.
 GO:0033523; P:histone H2B ubiquitination; IEA:Compara.
 GO:0045190; P:isotype switching; IEA:Compara.
 GO:0007286; P:spermatid development; IEA:Compara. 
Interpro
 IPR017335; E3_Ub_ligase_RNF8.
 IPR000253; FHA_dom.
 IPR008984; SMAD_FHA_domain. 
Pfam
 PF00498; FHA 
SMART
  
PROSITE
 PS50006; FHA_DOMAIN 
PRINTS