CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006723
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone H2B 
Protein Synonyms/Alias
  
Gene Name
 hh2b 
Gene Synonyms/Alias
 NCU02435 
Created Date
 July 27, 2013 
Organism
 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DS 
NCBI Taxa ID
 367110 
Lysine Modification
Position
Peptide
Type
References
8MPPKPADKKPASKAPacetylation[1]
9PPKPADKKPASKAPAacetylation[1, 2]
13ADKKPASKAPATASKacetylation[1, 2]
20KAPATASKAPEKKDAacetylation[1, 2]
29PEKKDAGKKTAASGDacetylation[1, 2]
30EKKDAGKKTAASGDKacetylation[2]
54TYSSYIYKVLKQVHPacetylation[1]
57SYIYKVLKQVHPDTGacetylation[1]
90RVATEASKLAAYNKKacetylation[1]
96SKLAAYNKKSTISSRacetylation[1]
97KLAAYNKKSTISSREacetylation[1]
119ILPGELAKHAVSEGTacetylation[1]
Reference
 [1] Extensive and varied modifications in histone H2B of wild-type and histone deacetylase 1 mutant Neurospora crassa.
 Anderson DC, Green GR, Smith K, Selker EU.
 Biochemistry. 2010 Jun 29;49(25):5244-57. [PMID: 20462202]
 [2] Mapping of lysine methylation and acetylation in core histones of Neurospora crassa.
 Xiong L, Adhvaryu KK, Selker EU, Wang Y.
 Biochemistry. 2010 Jun 29;49(25):5236-43. [PMID: 20433192
Functional Description
 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. 
Sequence Annotation
 MOD_RES 8 8 N6-acetyllysine; alternate (By
 MOD_RES 9 9 N6-acetyllysine; alternate (By
 MOD_RES 12 12 Phosphoserine (By similarity).
 MOD_RES 13 13 N6-acetyllysine (By similarity).
 MOD_RES 24 24 N6-acetyllysine; alternate (By
 CROSSLNK 8 8 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 9 9 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 24 24 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 25 25 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 131 131 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Isopeptide bond; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 137 AA 
Protein Sequence
MPPKPADKKP ASKAPATASK APEKKDAGKK TAASGDKKKR TKARKETYSS YIYKVLKQVH 60
PDTGISNRAM SILNSFVNDI FERVATEASK LAAYNKKSTI SSREIQTSVR LILPGELAKH 120
AVSEGTKAVT KYSSSTK 137 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000558; Histone_H2B. 
Pfam
 PF00125; Histone 
SMART
 SM00427; H2B 
PROSITE
 PS00357; HISTONE_H2B 
PRINTS
 PR00621; HISTONEH2B.