CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013503
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vesicle transport protein SFT2C 
Protein Synonyms/Alias
 SFT2 domain-containing protein 3 
Gene Name
 SFT2D3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
16QEYLAQGKAGGPAAAubiquitination[1, 2]
31EPLLAAEKAEEPGDRubiquitination[1]
211GRGAGLAKVLPV***ubiquitination[2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Membrane; Polymorphism; Protein transport; Reference proteome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 215 AA 
Protein Sequence
MADLHRQLQE YLAQGKAGGP AAAEPLLAAE KAEEPGDRPA EEWLGRAGLR WTWARSPAES 60
AAAGLTCLPS VTRGQRLAAG GGCLLLAALC FGLAALYAPV LLLRARKFAL LWSLGSALAL 120
AGSALLRGGA ACGRLLRCEE APSRPALLYM AALGATLFAA LGLRSTLLTV LGAGAQVAAL 180
LAALVGLLPW GGGTALRLAL GRLGRGAGLA KVLPV 215 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0016192; P:vesicle-mediated transport; IEA:InterPro. 
Interpro
 IPR007305; Vesicle_transpt_Got1/SFT2.
 IPR011691; Vesicle_transpt_SFT2. 
Pfam
 PF04178; Got1 
SMART
  
PROSITE
  
PRINTS