CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025826
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 MGC13098 protein variant 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
47ITINKDTKVPNACLFubiquitination[1]
68HTLGNIIKSQLLKDPubiquitination[2]
73IIKSQLLKDPQVLFAubiquitination[2]
83QVLFAGYKVPHPLEHubiquitination[2]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 180 AA 
Protein Sequence
LAKGSGGGGG GHLGSGRNGG GSMNAPPAFE SFLLFEGEKI TINKDTKVPN ACLFTINKED 60
HTLGNIIKSQ LLKDPQVLFA GYKVPHPLEH KIIIRVQTTP DYSPQEAFTN AITDLIRELS 120
LLEERFRVRA GPGGADGVGW TLARVPRPGT ALACFFGGPQ GEAAVMEEQG LPPQAPGHVD 180 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR009025; DNA-dir_RNA_pol_RBP11-like.
 IPR008193; RNA_pol_Rpb11_13-16kDa_CS. 
Pfam
  
SMART
  
PROSITE
 PS01154; RNA_POL_L_13KD 
PRINTS