CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029654
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA-directed RNA polymerases I, II, and III subunit RPABC2 
Protein Synonyms/Alias
  
Gene Name
 POLR2F 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
59ITTPYMTKYERARVLubiquitination[1, 2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 158 AA 
Protein Sequence
MSDNEDNFDG DDFDDVEEDE GLDDLENAEE EGQENVEILP SGERPQANQK RITTPYMTKY 60
ERARVLGTRA LQIAMCAPVM VELEGETDPL LIAMKELNAR SASEPPGEEP PWMDRGTRDE 120
HLPSCPGCPA VASNTRCCPP AACLPGISLS RRRRLREE 158 
Gene Ontology
 GO:0030880; C:RNA polymerase complex; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR020708; DNA-dir_RNA_polK_14-18kDa_CS.
 IPR006110; RNA_poly_omega/K/RPABC2.
 IPR006111; RNAP_K/Rpb6.
 IPR012293; RNAP_RPB6_omega. 
Pfam
 PF01192; RNA_pol_Rpb6 
SMART
  
PROSITE
 PS01111; RNA_POL_K_14KD 
PRINTS