CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003375
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 HTH-type transcriptional regulator YjdC 
Protein Synonyms/Alias
  
Gene Name
 yjdC 
Gene Synonyms/Alias
 cutA3; b4135; JW5733 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
45LRRFWPDKEAILYDAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
  
Sequence Annotation
 DOMAIN 1 60 HTH tetR-type.  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 191 AA 
Protein Sequence
MQREDVLGEA LKLLELQGIA NTTLEMVAER VDYPLDELRR FWPDKEAILY DALRYLSQQI 60
DVWRRQLMLD ETQTAEQKLL ARYQALSECV KNNRYPGCLF IAACTFYPDP GHPIHQLADQ 120
QKSAAYDFTH ELLTTLEVDD PAMVAKQMEL VLEGCLSRML VNRSQADVDT AHRLAEDILR 180
FARCRQGGAL T 191 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR009057; Homeodomain-like.
 IPR001647; HTH_TetR.
 IPR015893; Tet_transcr_reg_TetR-like_C.
 IPR011075; Tet_transcr_reg_TetR-rel_C. 
Pfam
 PF00440; TetR_N 
SMART
  
PROSITE
 PS01081; HTH_TETR_1
 PS50977; HTH_TETR_2 
PRINTS