CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006259
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Intercellular adhesion molecule 3 
Protein Synonyms/Alias
 ICAM-3; CDw50; ICAM-R; CD50 
Gene Name
 ICAM3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
401LRVLYGPKIDRATCPubiquitination[1]
412ATCPQHLKWKDKTRHubiquitination[1]
414CPQHLKWKDKTRHVLubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). ICAM3 is also a ligand for integrin alpha-D/beta-2. 
Sequence Annotation
 DOMAIN 46 103 Ig-like C2-type 1.
 DOMAIN 132 197 Ig-like C2-type 2.
 DOMAIN 234 301 Ig-like C2-type 3.
 DOMAIN 329 382 Ig-like C2-type 4.
 DOMAIN 416 469 Ig-like C2-type 5.
 CARBOHYD 52 52 N-linked (GlcNAc...).
 CARBOHYD 84 84 N-linked (GlcNAc...).
 CARBOHYD 87 87 N-linked (GlcNAc...).
 CARBOHYD 91 91 N-linked (GlcNAc...); atypical.
 CARBOHYD 101 101 N-linked (GlcNAc...) (Potential).
 CARBOHYD 110 110 N-linked (GlcNAc...).
 CARBOHYD 134 134 N-linked (GlcNAc...).
 CARBOHYD 206 206 N-linked (GlcNAc...).
 CARBOHYD 264 264 N-linked (GlcNAc...) (Potential).
 CARBOHYD 295 295 N-linked (GlcNAc...).
 CARBOHYD 308 308 N-linked (GlcNAc...) (Potential).
 CARBOHYD 320 320 N-linked (GlcNAc...) (Potential).
 CARBOHYD 363 363 N-linked (GlcNAc...).
 CARBOHYD 389 389 N-linked (GlcNAc...) (Potential).
 CARBOHYD 453 453 N-linked (GlcNAc...) (Potential).
 CARBOHYD 457 457 N-linked (GlcNAc...) (Potential).
 DISULFID 53 96
 DISULFID 139 190 Potential.
 DISULFID 241 294 Potential.
 DISULFID 336 375 Potential.
 DISULFID 423 462 Potential.  
Keyword
 3D-structure; Cell adhesion; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Immunoglobulin domain; Membrane; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 547 AA 
Protein Sequence
MATMVPSVLW PRACWTLLVC CLLTPGVQGQ EFLLRVEPQN PVLSAGGSLF VNCSTDCPSS 60
EKIALETSLS KELVASGMGW AAFNLSNVTG NSRILCSVYC NGSQITGSSN ITVYRLPERV 120
ELAPLPPWQP VGQNFTLRCQ VEDGSPRTSL TVVLLRWEEE LSRQPAVEEP AEVTATVLAS 180
RDDHGAPFSC RTELDMQPQG LGLFVNTSAP RQLRTFVLPV TPPRLVAPRF LEVETSWPVD 240
CTLDGLFPAS EAQVYLALGD QMLNATVMNH GDTLTATATA TARADQEGAR EIVCNVTLGG 300
ERREARENLT VFSFLGPIVN LSEPTAHEGS TVTVSCMAGA RVQVTLDGVP AAAPGQPAQL 360
QLNATESDDG RSFFCSATLE VDGEFLHRNS SVQLRVLYGP KIDRATCPQH LKWKDKTRHV 420
LQCQARGNPY PELRCLKEGS SREVPVGIPF FVNVTHNGTY QCQASSSRGK YTLVVVMDIE 480
AGSSHFVPVF VAVLLTLGVV TIVLALMYVF REHQRSGSYH VREESTYLPL TSMQPTEAMG 540
EEPSRAE 547 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0005178; F:integrin binding; TAS:ProtInc.
 GO:0016337; P:cell-cell adhesion; IEA:InterPro.
 GO:0050776; P:regulation of immune response; TAS:Reactome. 
Interpro
 IPR003988; ICAM.
 IPR013768; ICAM_N.
 IPR003987; ICAM_VCAM_N.
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003599; Ig_sub. 
Pfam
 PF03921; ICAM_N 
SMART
 SM00409; IG 
PROSITE
 PS50835; IG_LIKE 
PRINTS
 PR01473; ICAM.
 PR01472; ICAMVCAM1.