CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003800
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Delta-aminolevulinic acid dehydratase 
Protein Synonyms/Alias
 ALADH; Porphobilinogen synthase 
Gene Name
 Alad 
Gene Synonyms/Alias
 Lv 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
87GVPSRVPKDEQGSAAubiquitination[1]
179DGRVEAIKAALLKHGacetylation[2]
179DGRVEAIKAALLKHGubiquitination[1]
184AIKAALLKHGLGNRVacetylation[2]
184AIKAALLKHGLGNRVubiquitination[1]
199SVMSYSAKFASCFYGacetylation[3]
199SVMSYSAKFASCFYGsuccinylation[3]
252GADMLMVKPGLPYLDacetylation[3, 4]
252GADMLMVKPGLPYLDsuccinylation[3]
252GADMLMVKPGLPYLDubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [4] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758
Functional Description
 Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen (By similarity). 
Sequence Annotation
 ACT_SITE 199 199 Schiff-base intermediate with substrate
 ACT_SITE 252 252 Schiff-base intermediate with substrate
 METAL 122 122 Zinc 1; catalytic (By similarity).
 METAL 124 124 Zinc 1; catalytic (By similarity).
 METAL 131 131 Zinc 2 (By similarity).
 METAL 132 132 Zinc 1; catalytic (By similarity).
 METAL 223 223 Zinc 2 (By similarity).
 BINDING 209 209 Substrate 1 (By similarity).
 BINDING 221 221 Substrate 1 (By similarity).
 BINDING 279 279 Substrate 2 (By similarity).
 BINDING 318 318 Substrate 2 (By similarity).  
Keyword
 3D-structure; Allosteric enzyme; Complete proteome; Heme biosynthesis; Lyase; Metal-binding; Porphyrin biosynthesis; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 330 AA 
Protein Sequence
MHHQSVLHSG YFHPLLRSWQ TAASTVSASN LIYPIFVTDV PDDVQPIASL PGVARYGVNQ 60
LEEMLRPLVE AGLRCVLIFG VPSRVPKDEQ GSAADSEDSP TIEAVRLLRK TFPSLLVACD 120
VCLCPYTSHG HCGLLSENGA FLAEESRQRL AEVALAYAKA GCQVVAPSDM MDGRVEAIKA 180
ALLKHGLGNR VSVMSYSAKF ASCFYGPFRD AAQSSPAFGD RRCYQLPPGA RGLALRAVAR 240
DIQEGADMLM VKPGLPYLDM VREVKDKHPE LPLAVYQVSG EFAMLWHGAQ AGAFDLRTAV 300
LETMTAFRRA GADIIITYFA PQLLKWLKEE 330 
Gene Ontology
 GO:0032791; F:lead ion binding; ISS:UniProtKB.
 GO:0004655; F:porphobilinogen synthase activity; ISS:UniProtKB.
 GO:0008270; F:zinc ion binding; ISS:UniProtKB.
 GO:0071353; P:cellular response to interleukin-4; IDA:MGI.
 GO:0006783; P:heme biosynthetic process; ISS:UniProtKB.
 GO:0051260; P:protein homooligomerization; IEA:Compara.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR001731; Porphobilinogen_synth. 
Pfam
 PF00490; ALAD 
SMART
 SM01004; ALAD 
PROSITE
 PS00169; D_ALA_DEHYDRATASE 
PRINTS
 PR00144; DALDHYDRTASE.