CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039788
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 RNA polymerase I-specific transcription initiation factor RRN3 
Protein Synonyms/Alias
  
Gene Name
 RRN3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
22AASSSAVKKLGASRTubiquitination[1, 2]
84QLLDPDIKRLPWLNRubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 621 AA 
Protein Sequence
MAAPLLHTRL PGDAAASSSA VKKLGASRTG ISNMRALEND FFNSPPRKTV RFGGTVTEVL 60
LKYKKGETND FELLKNQLLD PDIKRLPWLN RSQTVVEEYL AFLGNLVSAQ TVFLRPCLSM 120
IASHFVPPRV IIKEGDVDVS DSDDEDDNLP ANFDTCHRAL QIIARYVPST PWFLMPILVE 180
KFPFVRKSER TLECYVHNLL RISVYFPTLR HEILELIIEK LLKLDVNASR QGIEDAEETA 240
TQTCGGTDST EGLFNMDEDE ETEHETKAGP ERLDQMVHPV AERLDILMSL VLSYMKDVCY 300
VDGKVDNGKT KDLYRDLINI FDKLLLPTHA SCHVQFFMFY LCSFKLGFAE AFLEHLWKKL 360
QDPSNPAIIR QAAGNYIGSF LARAKFIPLI TVKSCLDLLV NWLHIYLNNQ DSGTKAFCDV 420
ALHGPFYSAC QAVFYTFVFR HKQLLSGNLK EGLQYLQSLN FERIVMSQLN PLKICLPSVV 480
NFFAAITNKY QLVFCYTIIE RNNRQMLPVI RSTAGGDSVQ ICTNPLDTFF PFDPCVLKRS 540
KKFIDPIYQV WEDMSAEELQ EFKKPMKKDI VEDEDDDFLK GEVPQNDTVI GITPSSFDTH 600
FRSPSSSVGS PPVLYMQPSP L 621 
Gene Ontology
 GO:0005730; C:nucleolus; IDA:HPA. 
Interpro
 IPR007991; RNA_pol_I_trans_ini_fac_RRN3. 
Pfam
 PF05327; RRN3 
SMART
  
PROSITE
  
PRINTS