CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013859
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Putative oxidoreductase GLYR1 
Protein Synonyms/Alias
 Glyoxylate reductase 1 homolog; Nuclear protein NP60 
Gene Name
 Glyr1 
Gene Synonyms/Alias
 Np60 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
135KLSLSEGKVKKNMGEacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 May have oxidoreductase activity. Regulates p38 MAP kinase activity by mediating stress activation of p38alpha/MAPK14 and specifically regulating MAPK14 signaling. Indirectly promotes phosphorylation of MAPK14 and activation of ATF2. The phosphorylation of MAPK14 requires upstream activity of MAP2K4 and MAP2K6. Recruited on chromatin, recognizes and binds trimethylated 'Lys-36' of histone H3 (H3K36me3) (By similarity). 
Sequence Annotation
 DOMAIN 8 66 PWWP.
 DNA_BIND 167 179 A.T hook.
 NP_BIND 270 284 NAD (By similarity).
 BINDING 361 361 NAD (By similarity).
 BINDING 504 504 NAD (By similarity).
 MOD_RES 130 130 Phosphoserine (By similarity).
 MOD_RES 166 166 Phosphoserine (By similarity).
 MOD_RES 539 539 Phosphoserine (By similarity).  
Keyword
 Complete proteome; DNA-binding; NAD; Nucleus; Oxidoreductase; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 552 AA 
Protein Sequence
MAAVSLRLGD LVWGKLGRYP PWPGKIVNPP KDLKKPRGKK CFFVKFFGTE DHAWIKVEQL 60
KPYHAHKEEM IKINKGKRFQ QAVDAVEEFL RRAKGKDQTS SHTSADDKNR RNSSEERSRP 120
NSGDEKRKLS LSEGKVKKNM GEGKKRVTSG SADRGSKCLK RAQEQSPRKR GRPPKDEKDL 180
TIPESSTVKG MMAGPMAAFK WQPTASEPVK DADPHFHHFL LSQTEKPAVC YQAITKKLKI 240
CEEETGSTSI QAADSTAVNG SITPTDKKIG FLGLGLMGSG IVSNLLKMGH TVTVWNRTAE 300
KCDLFIQEGA RLGRTPAEVV STCDITFACV SDPKAAKDLV LGPSGVLQGI RPGKCYVDMS 360
TVDADTVTEL AQVIVSRGGR FLEAPVSGNQ QLSNDGMLVI LAAGDRGLYE DCSSCFQAMG 420
KTSFFLGEVG NAAKMMLIVN MVQGSFMATI AEGLTLAQVT GQSQQTLLDI LNQGQLASIF 480
LDQKCQNILQ GNFKPDFYLK YIQKDLRLAI ALGDAVNHPT PMAAAANEVY KRAKALDQSD 540
NDMSAVYRAY IH 552 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0050662; F:coenzyme binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
 GO:0004616; F:phosphogluconate dehydrogenase (decarboxylating) activity; IEA:InterPro.
 GO:0006098; P:pentose-phosphate shunt; IEA:InterPro. 
Interpro
 IPR008927; 6-PGluconate_DH_C-like.
 IPR006115; 6PGDH_NADP-bd.
 IPR017956; AT_hook_DNA-bd_motif.
 IPR013328; DH_multihelical.
 IPR015815; HIBADH-type.
 IPR016040; NAD(P)-bd_dom.
 IPR000313; PWWP. 
Pfam
 PF03446; NAD_binding_2
 PF00855; PWWP 
SMART
 SM00384; AT_hook 
PROSITE
 PS00895; 3_HYDROXYISOBUT_DH
 PS50812; PWWP 
PRINTS