CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013713
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S4 
Protein Synonyms/Alias
  
Gene Name
 rpsD 
Gene Synonyms/Alias
 GK2802 
Created Date
 July 27, 2013 
Organism
 Geobacillus kaustophilus (strain HTA426) 
NCBI Taxa ID
 235909 
Lysine Modification
Position
Peptide
Type
References
43HGPGQRRKLSEYGLQacetylation[1]
81EAGKMPGKHGENFMIacetylation[1]
Reference
 [1] Proteomic analysis of acetylation in thermophilic Geobacillus kaustophilus.
 Lee DW, Kim D, Lee YJ, Kim JA, Choi JY, Kang S, Pan JG.
 Proteomics. 2013 Aug;13(15):2278-82. [PMID: 23696451] 
Functional Description
 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity). 
Sequence Annotation
 DOMAIN 92 152 S4 RNA-binding.  
Keyword
 Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 200 AA 
Protein Sequence
MARYTGPMWK ISRRLGISLS GTGKELQKRP YPPGQHGPGQ RRKLSEYGLQ LQEKQKLRHM 60
YGVNERQFRK TFEEAGKMPG KHGENFMILL ESRLDNLVYR LGLARTRRQA RQLVTHGHIL 120
VDGSRVNIPS YRVKPGQTIA VREKSRNLQV IKEALEANNY IPDYLTFNPE KMEGTYTRLP 180
ERSELPAEIN EALIVEFYSR 200 
Gene Ontology
 GO:0015935; C:small ribosomal subunit; IEA:InterPro.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR022801; Ribosomal_S4/S9.
 IPR001912; Ribosomal_S4/S9_N.
 IPR005709; Ribosomal_S4_bac-type.
 IPR018079; Ribosomal_S4_CS.
 IPR002942; S4_RNA-bd. 
Pfam
 PF00163; Ribosomal_S4
 PF01479; S4 
SMART
 SM00363; S4 
PROSITE
 PS00632; RIBOSOMAL_S4
 PS50889; S4 
PRINTS