CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033025
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA-directed RNA polymerase III subunit RPC9 
Protein Synonyms/Alias
  
Gene Name
 CRCP 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
41REFLTALKSHKLTKAubiquitination[1]
101EPEAEQKKNTNSNVAubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 115 AA 
Protein Sequence
MEMKDANSAL LSNYETLKYI SKTPCRHQSP EIVREFLTAL KSHKLTKAEK LQLLNHRPVT 60
AVEIQLMVEE SEERLTEEQI EALLHTVTSI LPAEPEAEQK KNTNSNVAMD EEDPA 115 
Gene Ontology
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR010997; HRDC-like.
 IPR005574; RNA_pol_II_Rpb4.
 IPR006590; RNA_pol_II_Rpb4_core. 
Pfam
 PF03874; RNA_pol_Rpb4 
SMART
 SM00657; RPOL4c 
PROSITE
  
PRINTS