CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000643
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cellular nucleic acid-binding protein 
Protein Synonyms/Alias
 CNBP; Zinc finger protein 9 
Gene Name
 CNBP 
Gene Synonyms/Alias
 ZNF9 
Created Date
 July 27, 2013 
Organism
 Gallus gallus (Chicken) 
NCBI Taxa ID
 9031 
Lysine Modification
Position
Peptide
Type
References
98QCCYNCGKPGHLARDubiquitination[1]
113CDHADEQKCYSCGEFubiquitination[1]
125GEFGHIQKDCTKVKCubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 Single stranded DNA-binding protein, with specificity to the sterol regulatory element (SRE). Involved in sterol-mediated repression. 
Sequence Annotation
 ZN_FING 4 21 CCHC-type 1.
 ZN_FING 46 63 CCHC-type 2.
 ZN_FING 67 84 CCHC-type 3.
 ZN_FING 91 108 CCHC-type 4.
 ZN_FING 112 129 CCHC-type 5.
 ZN_FING 130 147 CCHC-type 6.
 ZN_FING 151 168 CCHC-type 7.  
Keyword
 Complete proteome; Cytoplasm; DNA-binding; Endoplasmic reticulum; Metal-binding; Reference proteome; Repeat; Repressor; Transcription; Transcription regulation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 172 AA 
Protein Sequence
MSSNECFKCG RTGHWARECP TGIGRGRGMR SRGRAGFQFM SSSLPDICYR CGESGHLAKD 60
CDLQEDKACY NCGRGGHIAK DCKEPKRERE QCCYNCGKPG HLARDCDHAD EQKCYSCGEF 120
GHIQKDCTKV KCYRCGETGH VAINCSKTSE VNCYRCGESG HLARECTIEA TA 172 
Gene Ontology
 GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR001878; Znf_CCHC. 
Pfam
 PF00098; zf-CCHC 
SMART
 SM00343; ZnF_C2HC 
PROSITE
 PS50158; ZF_CCHC 
PRINTS