CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010321
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cysteine desulfurase 
Protein Synonyms/Alias
 Selenocysteine beta-lyase; SCL; Selenocysteine lyase; Selenocysteine reductase 
Gene Name
 sufS 
Gene Synonyms/Alias
 csdB; ynhB; b1680; JW1670 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
68LSAQATEKMENVRKRacetylation[1]
164LPTLFDEKTRLLAITacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Cysteine desulfurases mobilize the sulfur from L- cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L-selenocysteine. Selenocysteine lyase activity is however unsure in vivo. 
Sequence Annotation
 ACT_SITE 364 364 Cysteine persulfide intermediate.
 MOD_RES 226 226 N6-(pyridoxal phosphate)lysine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; Lyase; Pyridoxal phosphate; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 406 AA 
Protein Sequence
MIFSVDKVRA DFPVLSREVN GLPLAYLDSA ASAQKPSQVI DAEAEFYRHG YAAVHRGIHT 60
LSAQATEKME NVRKRASLFI NARSAEELVF VRGTTEGINL VANSWGNSNV RAGDNIIISQ 120
MEHHANIVPW QMLCARVGAE LRVIPLNPDG TLQLETLPTL FDEKTRLLAI THVSNVLGTE 180
NPLAEMITLA HQHGAKVLVD GAQAVMHHPV DVQALDCDFY VFSGHKLYGP TGIGILYVKE 240
ALLQEMPPWE GGGSMIATVS LSEGTTWTKA PWRFEAGTPN TGGIIGLGAA LEYVSALGLN 300
NIAEYEQNLM HYALSQLESV PDLTLYGPQN RLGVIAFNLG KHHAYDVGSF LDNYGIAVRT 360
GHHCAMPLMA YYNVPAMCRA SLAMYNTHEE VDRLVTGLQR IHRLLG 406 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0031071; F:cysteine desulfurase activity; IDA:EcoCyc.
 GO:0030170; F:pyridoxal phosphate binding; IDA:EcoCyc.
 GO:0009000; F:selenocysteine lyase activity; IDA:EcoCyc.
 GO:0006534; P:cysteine metabolic process; IEA:InterPro.
 GO:0016226; P:iron-sulfur cluster assembly; IDA:EcoCyc.
 GO:0001887; P:selenium compound metabolic process; IGI:EcoCyc.
 GO:0006790; P:sulfur compound metabolic process; IDA:EcoCyc. 
Interpro
 IPR000192; Aminotrans_V/Cys_dSase.
 IPR020578; Aminotrans_V_PyrdxlP_BS.
 IPR010970; Cys_dSase_SufS.
 IPR015424; PyrdxlP-dep_Trfase.
 IPR015421; PyrdxlP-dep_Trfase_major_sub1.
 IPR015422; PyrdxlP-dep_Trfase_major_sub2. 
Pfam
 PF00266; Aminotran_5 
SMART
  
PROSITE
 PS00595; AA_TRANSFER_CLASS_5 
PRINTS