CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031239
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein LSM14 homolog A 
Protein Synonyms/Alias
 cDNA FLJ54754, highly similar to Protein FAM61A 
Gene Name
 LSM14A 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
11GTPYIGSKISLISKAubiquitination[1]
40NSTVALAKVRSFGTEubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 422 AA 
Protein Sequence
MSGGTPYIGS KISLISKAEI RYEGILYTID TENSTVALAK VRSFGTEDRP TDRPIPPRDE 60
VFEYIIFRGS DIKDLTVCEP PKPQCSLPQD PAIVQSSLGS STSSFQSMGS YGPFGRMPTY 120
SQFSPSSLVG QQFGAVGVGR SSPQLDPLRK SPTMEQAVQT ASAHLPAPAA VGRRSPVSTR 180
PLPSASQKAG ENQEHRRAEV HKVSRPENEQ LRNDNKRQVA PGAPSAPRRG RGGHRGGRGR 240
FGIRRDGPMK FEKDFDFESA NAQFNKEEID REFHNKLKLK EDKLEKQEKP VNGEDKGDSG 300
VDTQNSEGNA DEEDPLGPNC YYDKTKSFFD NISCDDNRER RPTWAEERRL NAETFGIPLR 360
PNRGRGGYRG RGGLGFRGGR GRGGGRGGTF TAPRGFRGGF RGGRGGREFA DFEYRKTTAF 420
GP 422 
Gene Ontology
  
Interpro
 IPR025762; DFDF.
 IPR019050; FDF_dom.
 IPR025761; FFD_box.
 IPR025609; Lsm14_N.
 IPR010920; LSM_dom.
 IPR025768; TFG_box. 
Pfam
 PF09532; FDF
 PF12701; LSM14 
SMART
  
PROSITE
 PS51512; DFDF
 PS51513; FFD
 PS51536; TFG 
PRINTS