CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008141
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Homoaconitase, mitochondrial 
Protein Synonyms/Alias
 Homoaconitate hydratase 
Gene Name
 LYS4 
Gene Synonyms/Alias
 LYS3; YDR234W; YD8419.01; YD9934.18 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
76GLGATKIKNPSQIVTacetylation[1]
258KTLIDWYKNRLQKLGacetylation[1]
439FKGRMGSKDALAYLAacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Responsible for the dehydration of cis-homoaconitate to homoisocitric acid. 
Sequence Annotation
 METAL 340 340 Iron-sulfur (4Fe-4S) (By similarity).
 METAL 407 407 Iron-sulfur (4Fe-4S) (By similarity).
 METAL 410 410 Iron-sulfur (4Fe-4S) (By similarity).  
Keyword
 Amino-acid biosynthesis; Complete proteome; Iron; Iron-sulfur; Lyase; Lysine biosynthesis; Metal-binding; Mitochondrion; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 693 AA 
Protein Sequence
MLRSTTFTRS FHSSRAWLKG QNLTEKIVQS YAVNLPEGKV VHSGDYVSIK PAHCMSHDNS 60
WPVALKFMGL GATKIKNPSQ IVTTLDHDIQ NKSEKNLTKY KNIENFAKKH HIDHYPAGRG 120
IGHQIMIEEG YAFPLNMTVA SDSHSNTYGG LGSLGTPIVR TDAAAIWATG QTWWQIPPVA 180
QVELKGQLPQ GVSGKDIIVA LCGLFNNDQV LNHAIEFTGD SLNALPIDHR LTIANMTTEW 240
GALSGLFPVD KTLIDWYKNR LQKLGTNNHP RINPKTIRAL EEKAKIPKAD KDAHYAKKLI 300
IDLATLTHYV SGPNSVKVSN TVQDLSQQDI KINKAYLVSC TNSRLSDLQS AADVVCPTGD 360
LNKVNKVAPG VEFYVAAASS EIEADARKSG AWEKLLKAGC IPLPSGCGPC IGLGAGLLEP 420
GEVGISATNR NFKGRMGSKD ALAYLASPAV VAASAVLGKI SSPAEVLSTS EIPFSGVKTE 480
IIENPVVEEE VNAQTEAPKQ SVEILEGFPR EFSGELVLCD ADNINTDGIY PGKYTYQDDV 540
PKEKMAQVCM ENYDAEFRTK VHPGDIVVSG FNFGTGSSRE QAATALLAKG INLVVSGSFG 600
NIFSRNSINN ALLTLEIPAL IKKLREKYQG APKELTRRTG WFLKWDVADA KVVVTEGSLD 660
GPVILEQKVG ELGKNLQEII VKGGLEGWVK SQL 693 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:SGD.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
 GO:0004409; F:homoaconitate hydratase activity; ISA:SGD.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0019878; P:lysine biosynthetic process via aminoadipic acid; IMP:SGD. 
Interpro
 IPR015931; Acnase/IPM_dHydase_lsu_aba_1/3.
 IPR015937; Acoase/IPM_deHydtase.
 IPR001030; Acoase/IPM_deHydtase_lsu_aba.
 IPR015928; Aconitase/3IPM_dehydase_swvl.
 IPR015932; Aconitase/IPMdHydase_lsu_aba_2.
 IPR018136; Aconitase_4Fe-4S_BS.
 IPR000573; AconitaseA/IPMdHydase_ssu_swvl.
 IPR004418; Homoaconitase_mito. 
Pfam
 PF00330; Aconitase
 PF00694; Aconitase_C 
SMART
  
PROSITE
 PS00450; ACONITASE_1
 PS01244; ACONITASE_2 
PRINTS
 PR00415; ACONITASE.