CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021917
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S3-2 
Protein Synonyms/Alias
  
Gene Name
 RPS3B 
Gene Synonyms/Alias
 At3g53870; F5K20_170 
Created Date
 July 27, 2013 
Organism
 Arabidopsis thaliana (Mouse-ear cress) 
NCBI Taxa ID
 3702 
Lysine Modification
Position
Peptide
Type
References
214VVIIHSPKEEEAIYAsumoylation[1]
Reference
 [1] Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis.
 Miller MJ, Barrett-Wilt GA, Hua Z, Vierstra RD.
 Proc Natl Acad Sci U S A. 2010 Sep 21;107(38):16512-7. [PMID: 20813957
Functional Description
  
Sequence Annotation
 DOMAIN 21 92 KH type-2.
 MOD_RES 212 212 Phosphoserine.
 CROSSLNK 62 62 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Complete proteome; Isopeptide bond; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 249 AA 
Protein Sequence
MTTQISKKRK FVADGVFYAE LNEVLTRELA EDGYSGVEVR VTPMRTEIII RATRTQNVLG 60
EKGRRIRELT SLVQKRFKFP VDSVELYAEK VNNRGLCAIA QAESLRYKLL GGLAVRRACY 120
GVLRFVMESG AKGCEVIVSG KLRAARAKSM KFKDGYMVSS GQPTKEYIDS AVRHVLLRQG 180
VLGIKVKVML DWDPKGISGP KTPLPDVVII HSPKEEEAIY APAQVAAPAA LVADAPLTAV 240
DYPAMIPVA 249 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:TAIR.
 GO:0016020; C:membrane; IDA:TAIR.
 GO:0009506; C:plasmodesma; IDA:TAIR.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0009651; P:response to salt stress; IEP:TAIR.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR004087; KH_dom.
 IPR004044; KH_dom_type_2.
 IPR009019; KH_prok-type.
 IPR001351; Ribosomal_S3_C.
 IPR005703; Ribosomal_S3_euk/arc. 
Pfam
 PF07650; KH_2
 PF00189; Ribosomal_S3_C 
SMART
 SM00322; KH 
PROSITE
 PS50823; KH_TYPE_2
 PS00548; RIBOSOMAL_S3 
PRINTS