CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001596
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CD2 antigen cytoplasmic tail-binding protein 2 
Protein Synonyms/Alias
 CD2 cytoplasmic domain-binding protein 2; CD2 tail-binding protein 2; U5 snRNP 52K protein; U5-52K 
Gene Name
 CD2BP2 
Gene Synonyms/Alias
 KIAA1178 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
127LDNIDWVKIRERPPGubiquitination[1, 2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Involved in pre-mRNA splicing as component of the U5 snRNP complex that is involved in spliceosome assembly. 
Sequence Annotation
 DOMAIN 280 338 GYF.
 MOD_RES 49 49 Phosphoserine.
 MOD_RES 118 118 Phosphoserine.
 MOD_RES 194 194 Phosphoserine.
 MOD_RES 195 195 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 341 AA 
Protein Sequence
MPKRKVTFQG VGDEEDEDEI IVPKKKLVDP VAGSGGPGSR FKGKHSLDSD EEEDDDDGGS 60
SKYDILASED VEGQEAATLP SEGGVRITPF NLQEEMEEGH FDADGNYFLN RDAQIRDSWL 120
DNIDWVKIRE RPPGQRQASD SEEEDSLGQT SMSAQALLEG LLELLLPRET VAGALRRLGA 180
RGGGKGRKGP GQPSSPQRLD RLSGLADQMV ARGNLGVYQE TRERLAMRLK GLGCQTLGPH 240
NPTPPPSLDM FAEELAEEEL ETPTPTQRGE AESRGDGLVD VMWEYKWENT GDAELYGPFT 300
SAQMQTWVSE GYFPDGVYCR KLDPPGGQFY NSKRIDFDLY T 341 
Gene Ontology
 GO:0005737; C:cytoplasm; TAS:ProtInc.
 GO:0005654; C:nucleoplasm; IDA:BHF-UCL.
 GO:0005682; C:U5 snRNP; IDA:BHF-UCL.
 GO:0043021; F:ribonucleoprotein complex binding; IDA:BHF-UCL.
 GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:BHF-UCL.
 GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB. 
Interpro
 IPR003169; GYF. 
Pfam
 PF02213; GYF 
SMART
 SM00444; GYF 
PROSITE
 PS50829; GYF 
PRINTS