CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040041
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 6-phosphogluconate dehydrogenase, decarboxylating 
Protein Synonyms/Alias
  
Gene Name
 PGD 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
87AVDDFIEKLRRCRDLubiquitination[1]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (By similarity). 
Sequence Annotation
 ACT_SITE 162 162 Proton acceptor (By similarity).
 ACT_SITE 169 169 Proton donor (By similarity).  
Keyword
 Complete proteome; NADP; Oxidoreductase; Pentose shunt; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 461 AA 
Protein Sequence
MAQADIALIG LAVMGQNLIL NMNDHGFVVC AFNRTVSKVD DFLANEAKGT KVVGAQSLKE 60
MVSKLKKPRR IILLVKAGQA VDDFIEKLRR CRDLKAKGIL FVGSGVSGGE EGARYGPSLM 120
PGGNKEAWPH IKTIFQGIAA KVGTGEPCCD WVGDEGAGHF VKMVHNGIEY GDMQLICEAY 180
HLMKDVLGMA QDEMAQAFED WNKTELDSFL IEITANILKF QDTDGKHLLP KIRDSAGQKG 240
TGKWTAISAL EYGVPVTLIG EAVFARCLSS LKDERIQASK KLKGPQKFQF DGDKKSFLED 300
IRKALYASKI ISYAQGFMLL RQAATEFGWT LNYGGIALMW RGGCIIRSVF LGKIKDAFDR 360
NPELQNLLLD DFFKSAVENC QDSWRRAVST GVQAGIPMPC FTTALSFYDG YRHEMLPASL 420
IQAQRDYFGA HTYELLAKPG QFIHTNWTGH GGTVSSSSYN A 461 
Gene Ontology
 GO:0050661; F:NADP binding; IEA:InterPro.
 GO:0004616; F:phosphogluconate dehydrogenase (decarboxylating) activity; IEA:EC.
 GO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-UniPathway. 
Interpro
 IPR008927; 6-PGluconate_DH_C-like.
 IPR006114; 6PGDH_C.
 IPR006113; 6PGDH_decarbox.
 IPR006115; 6PGDH_NADP-bd.
 IPR006184; 6PGdom_BS.
 IPR013328; DH_multihelical.
 IPR012284; Fibritin/6PGD_C-extension.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF00393; 6PGD
 PF03446; NAD_binding_2 
SMART
  
PROSITE
 PS00461; 6PGD 
PRINTS