CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025814
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UV excision repair protein RAD23 homolog A variant 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
33TLQQQTFKIRMEPDEubiquitination[1]
64AFPVAGQKLIYAGKIubiquitination[1]
70QKLIYAGKILSDDVPubiquitination[1]
86RDYRIDEKNFVVVMVubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965] 
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 379 AA 
Protein Sequence
VACCVRIPGP PRRSGPAMAV TITLKTLQQQ TFKIRMEPDE TVKVLKEKIE AEKGRDAFPV 60
AGQKLIYAGK ILSDDVPIRD YRIDEKNFVV VMVTKTKAGQ GTSAPPEASP TAAPESSTSF 120
PPAPTSGMSH PPPAAREDKS PSEESAPTTS PESVSGSVPS SGSSGREEDA ASTLVTGSEY 180
ETMLTEIMSM GYERERVVAA LRASYNNPHR AVEYLLTGIP GSPEPEHGSV QESQVSEQPA 240
TEAGENPLEF LRDQPQFQNM RQVIQQNPAL LPALLQQLGQ ENPQLLQQIS RHQEQFIQML 300
NEPPGELADI SDVEGEVGAI GEEAPQMNYI QVTPQEKEAI ERLKALGFPE SLVIQAYFAC 360
EKNENLAANF LLSQNFDDE 379 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0003684; F:damaged DNA binding; IEA:InterPro.
 GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
 GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. 
Interpro
 IPR004806; Rad23.
 IPR006636; STI1_HS-bd.
 IPR009060; UBA-like.
 IPR000449; UBA/transl_elong_EF1B_N.
 IPR015940; UBA/transl_elong_EF1B_N_euk.
 IPR000626; Ubiquitin.
 IPR019955; Ubiquitin_supergroup.
 IPR015360; XPC-bd. 
Pfam
 PF00627; UBA
 PF00240; ubiquitin
 PF09280; XPC-binding 
SMART
 SM00727; STI1
 SM00165; UBA
 SM00213; UBQ 
PROSITE
 PS50030; UBA
 PS50053; UBIQUITIN_2 
PRINTS
 PR01839; RAD23PROTEIN.