CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008537
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Spermine synthase 
Protein Synonyms/Alias
 SPMSY; Spermidine aminopropyltransferase 
Gene Name
 SMS 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
16LDFMLGAKADGETILubiquitination[1]
98NKVEERMKELSQDSTubiquitination[2]
151DSPYQNIKILHSKQFubiquitination[2, 3, 4, 5]
186RAIMGSGKEDYTGKDubiquitination[4]
230QMVIDGCKKYMRKTCubiquitination[4]
235GCKKYMRKTCGDVLDubiquitination[6]
Reference
 [1] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [5] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [6] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 Catalyzes the production of spermine from spermidine and decarboxylated S-adenosylmethionine (dcSAM). 
Sequence Annotation
 REGION 255 256 S-adenosylmethioninamine binding.
 ACT_SITE 276 276 Proton acceptor (Probable).
 BINDING 148 148 S-adenosylmethioninamine.
 BINDING 177 177 Spermidine.
 BINDING 201 201 Spermidine.
 BINDING 220 220 S-adenosylmethioninamine.
 BINDING 351 351 Spermidine.
 BINDING 353 353 Spermidine.
 MOD_RES 2 2 N-acetylalanine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Mental retardation; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 366 AA 
Protein Sequence
MAAARHSTLD FMLGAKADGE TILKGLQSIF QEQGMAESVH TWQDHGYLAT YTNKNGSFAN 60
LRIYPHGLVL LDLQSYDGDA QGKEEIDSIL NKVEERMKEL SQDSTGRVKR LPPIVRGGAI 120
DRYWPTADGR LVEYDIDEVV YDEDSPYQNI KILHSKQFGN ILILSGDVNL AESDLAYTRA 180
IMGSGKEDYT GKDVLILGGG DGGILCEIVK LKPKMVTMVE IDQMVIDGCK KYMRKTCGDV 240
LDNLKGDCYQ VLIEDCIPVL KRYAKEGREF DYVINDLTAV PISTSPEEDS TWEFLRLILD 300
LSMKVLKQDG KYFTQGNCVN LTEALSLYEE QLGRLYCPVE FSKEIVCVPS YLELWVFYTV 360
WKKAKP 366 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0004766; F:spermidine synthase activity; TAS:ProtInc.
 GO:0016768; F:spermine synthase activity; IEA:EC.
 GO:0006555; P:methionine metabolic process; TAS:ProtInc.
 GO:0006595; P:polyamine metabolic process; TAS:Reactome.
 GO:0006597; P:spermine biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR001045; Spermidine/spermine_synthase.
 IPR015576; Spermine_synthase. 
Pfam
 PF01564; Spermine_synth 
SMART
  
PROSITE
 PS01330; SPERMIDINE_SYNTHASE_1
 PS51006; SPERMIDINE_SYNTHASE_2 
PRINTS