CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017533
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable RNA-binding protein EIF1AD 
Protein Synonyms/Alias
 Eukaryotic translation initiation factor 1A domain-containing protein; Haponin 
Gene Name
 EIF1AD 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
56FLVSMPSKYRKNIWIubiquitination[1, 2, 3]
98DHVRSLQKEGFWPEAubiquitination[1, 3]
112AFSEVAEKHNNRNRQubiquitination[1, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Plays a role into cellular response to oxidative stress. Decreases cell proliferation. 
Sequence Annotation
 DOMAIN 5 89 S1-like.
 MOTIF 6 12 Nuclear localization signal (Potential).
 MOTIF 56 65 Nuclear localization signal (Potential).
 MOD_RES 33 33 Phosphothreonine.
 MOD_RES 155 155 Phosphoserine.
 MOD_RES 159 159 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 165 AA 
Protein Sequence
MSQATKRKHV VKEVLGEHIV PSDQQQIVRV LRTPGNNLHE VETAQGQRFL VSMPSKYRKN 60
IWIKRGDFLI VDPIEEGEKV KAEISFVLCK DHVRSLQKEG FWPEAFSEVA EKHNNRNRQT 120
QPELPAEPQL SGEESSSEDD SDLFVNTNRR QYHESEEESE EEEAA 165 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003743; F:translation initiation factor activity; IEA:InterPro. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR006196; RNA-binding_domain_S1_IF1.
 IPR001253; TIF_eIF-1A. 
Pfam
 PF01176; eIF-1a 
SMART
 SM00652; eIF1a 
PROSITE
 PS50832; S1_IF1_TYPE 
PRINTS