CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003821
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Thioredoxin 
Protein Synonyms/Alias
 Trx; ATL-derived factor; ADF 
Gene Name
 Txn 
Gene Synonyms/Alias
 Txn1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
3*****MVKLIESKEAacetylation[1, 2]
8MVKLIESKEAFQEALacetylation[1, 3, 4, 5]
8MVKLIESKEAFQEALsuccinylation[5]
8MVKLIESKEAFQEALubiquitination[6]
39CGPCKMIKPFFHSLCacetylation[1, 2, 4, 5, 7, 8]
39CGPCKMIKPFFHSLCsuccinylation[5]
39CGPCKMIKPFFHSLCubiquitination[6]
81MPTFQFYKKGQKVGEacetylation[1, 2]
85QFYKKGQKVGEFSGAacetylation[5]
85QFYKKGQKVGEFSGAsuccinylation[5]
94GEFSGANKEKLEASIacetylation[1, 5, 7]
94GEFSGANKEKLEASIsuccinylation[5]
96FSGANKEKLEASITEacetylation[7]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [4] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [5] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [6] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [7] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [8] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654
Functional Description
 Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). Plays a role in the reversible S-nitrosylation of cysteine residues in target proteins, and thereby contributes to the response to intracellular nitric oxide. Nitrosylates the active site Cys of CASP3 in response to nitric oxide (NO), and thereby inhibits caspase-3 activity. Induces the FOS/JUN AP-1 DNA binding activity in ionizing radiation (IR) cells through its oxidation/reduction status and stimulates AP-1 transcriptional activity (By similarity). 
Sequence Annotation
 DOMAIN 2 105 Thioredoxin.
 ACT_SITE 32 32 Nucleophile (By similarity).
 ACT_SITE 35 35 Nucleophile (By similarity).
 MOD_RES 3 3 N6-acetyllysine (By similarity).
 MOD_RES 39 39 N6-acetyllysine (By similarity).
 MOD_RES 62 62 S-nitrosocysteine (By similarity).
 MOD_RES 69 69 S-nitrosocysteine (By similarity).
 MOD_RES 73 73 S-nitrosocysteine; alternate (By
 DISULFID 32 35 Redox-active (By similarity).
 DISULFID 73 73 Interchain; alternate (By similarity).  
Keyword
 Acetylation; Activator; Complete proteome; Cytoplasm; Disulfide bond; Electron transport; Nucleus; Redox-active center; Reference proteome; S-nitrosylation; Secreted; Transcription; Transcription regulation; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 105 AA 
Protein Sequence
MVKLIESKEA FQEALAAAGD KLVVVDFSAT WCGPCKMIKP FFHSLCDKYS NVVFLEVDVD 60
DCQDVAADCE VKCMPTFQFY KKGQKVGEFS GANKEKLEAS ITEYA 105 
Gene Ontology
 GO:0030424; C:axon; IEA:Compara.
 GO:0005829; C:cytosol; IDA:MGI.
 GO:0030425; C:dendrite; IEA:Compara.
 GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0043025; C:neuronal cell body; IEA:Compara.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0009055; F:electron carrier activity; IEA:InterPro.
 GO:0015037; F:peptide disulfide oxidoreductase activity; IDA:MGI.
 GO:0015035; F:protein disulfide oxidoreductase activity; IEA:InterPro.
 GO:0016999; P:antibiotic metabolic process; IEA:Compara.
 GO:0045454; P:cell redox homeostasis; IDA:MGI.
 GO:0035690; P:cellular response to drug; IEA:Compara.
 GO:0071333; P:cellular response to glucose stimulus; IEA:Compara.
 GO:0071455; P:cellular response to hyperoxia; IEA:Compara.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0006662; P:glycerol ether metabolic process; IEA:InterPro.
 GO:0046826; P:negative regulation of protein export from nucleus; IDA:MGI.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.
 GO:0043388; P:positive regulation of DNA binding; ISS:UniProtKB.
 GO:0033158; P:regulation of protein import into nucleus, translocation; ISS:UniProtKB.
 GO:0014823; P:response to activity; IEA:Compara.
 GO:0048678; P:response to axon injury; IEA:Compara.
 GO:0071548; P:response to dexamethasone stimulus; IEA:Compara.
 GO:0009314; P:response to radiation; ISS:UniProtKB.
 GO:0010269; P:response to selenium ion; IEA:Compara.
 GO:0097068; P:response to thyroxine stimulus; IEA:Compara.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR005746; Thioredoxin.
 IPR012336; Thioredoxin-like_fold.
 IPR017937; Thioredoxin_CS.
 IPR013766; Thioredoxin_domain. 
Pfam
 PF00085; Thioredoxin 
SMART
  
PROSITE
 PS00194; THIOREDOXIN_1
 PS51352; THIOREDOXIN_2 
PRINTS
 PR00421; THIOREDOXIN.