CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015268
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Sterile alpha and TIR motif-containing protein 1 
Protein Synonyms/Alias
 Tir-1 homolog; MyD88-5 
Gene Name
 Sarm1 
Gene Synonyms/Alias
 Kiaa0524 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
363KSLQGKTKVFSDIGAubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Negative regulator of MYD88- and TRIF-dependent toll- like receptor signaling pathway which plays a pivotal role in activating axonal degeneration following injury. Promotes Wallerian degeneration an injury-induced axonal death pathway which involves degeneration of an axon distal to the injury site. Can activate neuronal death in response to stress. Regulates dendritic arborization through the MAPK4-JNK pathway. Involved in innate immune response. Inhibits both TICAM1/TRIF- and MYD88- dependent activation of JUN/AP-1, TRIF-dependent activation of NF- kappa-B and IRF3, and the phosphorylation of MAPK14/p38. Can restrict West Nile virus (WNV) pathogenesis. 
Sequence Annotation
 DOMAIN 412 476 SAM 1.
 DOMAIN 486 548 SAM 2.
 DOMAIN 559 657 TIR.  
Keyword
 Alternative splicing; Cell junction; Cell projection; Complete proteome; Cytoplasm; Differentiation; Immunity; Innate immunity; Mitochondrion; Neurogenesis; Reference proteome; Repeat; Synapse; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 724 AA 
Protein Sequence
MVLTLLFSAY KLCRFFTMSG PRPGADRLTV PGPDRSGGAS PWWAAGGRGS REVSPGVGTE 60
VQGALERSLP ELQQALSELK QASAARAVGA GLAEVFQLVE EAWLLPAVGR EVAQGLCDAI 120
RLDGGLDLLL RLLQAPELET RVQAARLLEQ ILVAENRDRV ARIGLGVILN LAKEREPVEL 180
ARSVAGILEH MFKHSEETCQ RLVAAGGLDA VLYWCRRTDP ALLRHCALAL ANCALHGGQT 240
VQRCMVEKRA AEWLFPLAFS KEDELLRLHA CLAVAVLATN KEVEREVEHS GTLALVEPLV 300
ASLDPGRFAR CLVDASDTSQ GRGPDDLQSL VLLLDSSRLE AQCIGAFYLC AEAAIKSLQG 360
KTKVFSDIGA IQSLKRLVSY STNGTTSALA KRALRLLGEE VPRRILPCVA SWKEAEVQTW 420
LQQIGFSQYC ENFREQQVDG DLLLRLTDEE LQTDLGMKSS ITRKRFFREL TELKTFASYA 480
TCDRSNLADW LGSLDPRFRQ YTYGLVSCGL DRSLLHRVSE QQLLEDCGIR LGVHRTRILS 540
AARGHFAQTG LRSLRRPSLH DDGPRDKQWG RATLTSMSLS LAPEMLHSPL PCTGGKLSGD 600
TPDVFISYRR NSGSQLASLL KVHLQLHGFS VFIDVEKLEA GKFEDKLIQS VIAARNFVLV 660
LSAGALDKCM QDHDCKDWVH KEIVTALSCG KNIVPIIDGF EWPEPQALPE DMQAVLTFNG 720
IKWSHEYQEA TIEKIIRFLQ GRPSQDSSAG SDTSLEGATP MGLP 764 
Gene Ontology
 GO:0030424; C:axon; IEA:UniProtKB-SubCell.
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0030425; C:dendrite; IMP:UniProtKB.
 GO:0031315; C:extrinsic to mitochondrial outer membrane; IDA:MGI.
 GO:0005874; C:microtubule; IDA:UniProtKB.
 GO:0045202; C:synapse; IDA:UniProtKB.
 GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
 GO:0042981; P:regulation of apoptotic process; IMP:MGI.
 GO:0048814; P:regulation of dendrite morphogenesis; IMP:UniProtKB.
 GO:1901214; P:regulation of neuron death; IMP:UniProtKB.
 GO:0009749; P:response to glucose stimulus; IMP:MGI.
 GO:0007165; P:signal transduction; IEA:InterPro. 
Interpro
 IPR011989; ARM-like.
 IPR016024; ARM-type_fold.
 IPR001660; SAM.
 IPR013761; SAM/pointed.
 IPR011510; SAM_2.
 IPR000157; TIR_dom. 
Pfam
 PF07647; SAM_2
 PF13676; TIR_2 
SMART
 SM00454; SAM
 SM00255; TIR 
PROSITE
 PS50105; SAM_DOMAIN
 PS50104; TIR 
PRINTS