CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021193
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable E3 ubiquitin-protein ligase makorin-2 
Protein Synonyms/Alias
 RING finger protein 62 
Gene Name
 MKRN2 
Gene Synonyms/Alias
 RNF62; HSPC070 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
4****MSTKQITCRYFubiquitination[1, 2]
42TICKYYQKGYCAYGTubiquitination[2, 3]
143PQPSPEMKPHSYLDAubiquitination[2]
214EQRKAHEKICMLTFEubiquitination[2]
278IRQWRCAKQFENPIIubiquitination[2, 3]
310YWVEDQNKKNELIEAubiquitination[1]
311WVEDQNKKNELIEAFubiquitination[2]
319NELIEAFKQGMGKKAubiquitination[2]
328GMGKKACKYFEQGKGubiquitination[2]
334CKYFEQGKGTCPFGSubiquitination[1, 2]
342GTCPFGSKCLYRHAYubiquitination[2]
359GRLAEPEKPRKQLSSubiquitination[2]
362AEPEKPRKQLSSQGTubiquitination[2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins (By similarity). 
Sequence Annotation
 ZN_FING 2 29 C3H1-type 1.
 ZN_FING 31 58 C3H1-type 2.
 ZN_FING 165 192 C3H1-type 3.
 ZN_FING 238 292 RING-type.
 ZN_FING 321 350 C3H1-type 4.
 REGION 193 222 Makorin-type Cys-His.  
Keyword
 Complete proteome; Ligase; Metal-binding; Polymorphism; Reference proteome; Repeat; Ubl conjugation pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 416 AA 
Protein Sequence
MSTKQITCRY FMHGVCREGS QCLFSHDLAN SKPSTICKYY QKGYCAYGTR CRYDHTRPSA 60
AAGGAVGTMA HSVPSPAFHS PHPPSEVTAS IVKTNSHEPG KREKRTLVLR DRNLSGMAER 120
KTQPSMVSNP GSCSDPQPSP EMKPHSYLDA IRSGLDDVEA SSSYSNEQQL CPYAAAGECR 180
FGDACVYLHG EVCEICRLQV LHPFDPEQRK AHEKICMLTF EHEMEKAFAF QASQDKVCSI 240
CMEVILEKAS ASERRFGILS NCNHTYCLSC IRQWRCAKQF ENPIIKSCPE CRVISEFVIP 300
SVYWVEDQNK KNELIEAFKQ GMGKKACKYF EQGKGTCPFG SKCLYRHAYP DGRLAEPEKP 360
RKQLSSQGTV RFFNSVRLWD FIENRESRHV PNNEDVDMTE LGDLFMHLSG VESSEP 416 
Gene Ontology
 GO:0005622; C:intracellular; IDA:UniProtKB.
 GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway. 
Interpro
 IPR026290; Makorin-related.
 IPR026293; Makorin_2.
 IPR000571; Znf_CCCH.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD.
 IPR017907; Znf_RING_CS. 
Pfam
 PF00642; zf-CCCH
 PF13639; zf-RING_2 
SMART
 SM00184; RING
 SM00356; ZnF_C3H1 
PROSITE
 PS50103; ZF_C3H1
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS