CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020396
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 tRNA pseudouridine(38/39) synthase 
Protein Synonyms/Alias
 tRNA pseudouridine synthase 3; tRNA pseudouridylate synthase 3; tRNA-uridine isomerase 3 
Gene Name
 PUS3 
Gene Synonyms/Alias
 FKSG32 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
99KLFEALTKTRLVESRubiquitination[1]
227HDFRNLCKMDVANGVubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Formation of pseudouridine at position 39 in the anticodon stem and loop of transfer RNAs (By similarity). 
Sequence Annotation
 ACT_SITE 118 118 Nucleophile (By similarity).
 BINDING 195 195 Substrate (By similarity).
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 456 456 Phosphothreonine.
 MOD_RES 468 468 Phosphothreonine.  
Keyword
 Acetylation; Complete proteome; Isomerase; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; tRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 481 AA 
Protein Sequence
MAYNDTDRNQ TEKLLKRVRE LEQEVQRLKK EQAKNKEDSN IRENSAGAGK TKRAFDFSAH 60
GRRHVALRIA YMGWGYQGFA SQENTNNTIE EKLFEALTKT RLVESRQTSN YHRCGRTDKG 120
VSAFGQVISL DLRSQFPRGR DSEDFNVKEE ANAAAEEIRY THILNRVLPP DIRILAWAPV 180
EPSFSARFSC LERTYRYFFP RADLDIVTMD YAAQKYVGTH DFRNLCKMDV ANGVINFQRT 240
ILSAQVQLVG QSPGEGRWQE PFQLCQFEVT GQAFLYHQVR CMMAILFLIG QGMEKPEIID 300
ELLNIEKNPQ KPQYSMAVEF PLVLYDCKFE NVKWIYDQEA QEFNITHLQQ LWANHAVKTH 360
MLYSMLQGLD TVPVPCGIGP KMDGMTEWGN VKPSVIKQTS AFVEGVKMRT YKPLMDRPKC 420
QGLESRIQHF VRRGRIEHPH LFHEEETKAK RDCNDTLEEE NTNLETPTKR VCVDTEIKSI 480
I 481 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0009982; F:pseudouridine synthase activity; IEA:Compara.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0031119; P:tRNA pseudouridine synthesis; IEA:Compara. 
Interpro
 IPR020103; PsdUridine_synth_cat_dom.
 IPR001406; PsdUridine_synth_TruA.
 IPR020097; PsdUridine_synth_TruA_a/b_dom.
 IPR020095; PsdUridine_synth_TruA_C.
 IPR020094; PsdUridine_synth_TruA_N. 
Pfam
 PF01416; PseudoU_synth_1 
SMART
  
PROSITE
  
PRINTS