CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000637
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ras-related protein Rab-33B 
Protein Synonyms/Alias
  
Gene Name
 Rab33b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
149PRILVGNKCDLRSAIubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Protein transport. Acts, in coordination with RAB6A, to regulate intra-Golgi retrograde trafficking (By similarity). It is involved in autophagy, acting as a modulator of autophagosome formation. 
Sequence Annotation
 NP_BIND 39 46 GTP.
 NP_BIND 88 92 GTP.
 NP_BIND 148 151 GTP.
 NP_BIND 178 180 GTP.
 MOD_RES 229 229 Cysteine methyl ester (By similarity).
 LIPID 227 227 S-geranylgeranyl cysteine (By
 LIPID 229 229 S-geranylgeranyl cysteine (By  
Keyword
 3D-structure; Autophagy; Complete proteome; Direct protein sequencing; Golgi apparatus; GTP-binding; Lipoprotein; Membrane; Methylation; Nucleotide-binding; Prenylation; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 229 AA 
Protein Sequence
MTSEMESSLE VSFSSSCAVS GASGCLPPAR SRIFKIIVIG DSNVGKTCLT YRFCAGRFPD 60
RTEATIGVDF RERAVDIDGE RIKIQLWDTA GQERFRKSMV QHYYRNVHAV VFVYDMTNMA 120
SFHSLPAWIE ECKQHLLAND IPRILVGNKC DLRSAIQVPT DLAQKFADTH SMPLFETSAK 180
NPNDNDHVEA IFMTLAHKLK SHKPLMLSQL PDNRISLKPE TKPAVTCWC 229 
Gene Ontology
 GO:0005796; C:Golgi lumen; IDA:UniProtKB.
 GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0006914; P:autophagy; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:2000785; P:regulation of autophagic vacuole assembly; IMP:UniProtKB.
 GO:2000156; P:regulation of retrograde vesicle-mediated transport, Golgi to ER; ISS:UniProtKB.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
 PS51419; RAB 
PRINTS
 PR00449; RASTRNSFRMNG.