CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001488
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Leucine-rich repeats and immunoglobulin-like domains protein 2 
Protein Synonyms/Alias
 LIG-2 
Gene Name
 LRIG2 
Gene Synonyms/Alias
 KIAA0806; LIG2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
255RNGISKLKDGAFFGLubiquitination[1]
731APRLNWTKDDGPLLVubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
 DOMAIN 41 75 LRRNT.
 REPEAT 76 97 LRR 1.
 REPEAT 98 119 LRR 2.
 REPEAT 121 142 LRR 3.
 REPEAT 145 166 LRR 4.
 REPEAT 168 189 LRR 5.
 REPEAT 193 214 LRR 6.
 REPEAT 216 237 LRR 7.
 REPEAT 240 261 LRR 8.
 REPEAT 264 285 LRR 9.
 REPEAT 288 309 LRR 10.
 REPEAT 312 333 LRR 11.
 REPEAT 336 357 LRR 12.
 REPEAT 360 382 LRR 13.
 REPEAT 387 408 LRR 14.
 REPEAT 411 432 LRR 15.
 DOMAIN 443 494 LRRCT.
 DOMAIN 498 597 Ig-like C2-type 1.
 DOMAIN 602 691 Ig-like C2-type 2.
 DOMAIN 696 785 Ig-like C2-type 3.
 CARBOHYD 91 91 N-linked (GlcNAc...) (Potential).
 CARBOHYD 121 121 N-linked (GlcNAc...) (Potential).
 CARBOHYD 173 173 N-linked (GlcNAc...) (Potential).
 CARBOHYD 189 189 N-linked (GlcNAc...) (Potential).
 CARBOHYD 274 274 N-linked (GlcNAc...) (Potential).
 CARBOHYD 441 441 N-linked (GlcNAc...) (Potential).
 CARBOHYD 468 468 N-linked (GlcNAc...) (Potential).
 CARBOHYD 514 514 N-linked (GlcNAc...) (Potential).
 CARBOHYD 571 571 N-linked (GlcNAc...) (Potential).
 CARBOHYD 589 589 N-linked (GlcNAc...) (Potential).
 CARBOHYD 687 687 N-linked (GlcNAc...) (Potential).
 CARBOHYD 728 728 N-linked (GlcNAc...) (Potential).
 DISULFID 519 580 By similarity.
 DISULFID 623 675 By similarity.
 DISULFID 717 766 By similarity.  
Keyword
 Cell membrane; Complete proteome; Cytoplasm; Disulfide bond; Glycoprotein; Immunoglobulin domain; Leucine-rich repeat; Membrane; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1065 AA 
Protein Sequence
MAPAPLGVPE EQLLGCRSRV LSRLLFIAQT ALLLLPAAGA GLCPAPCSCR IPLLDCSRRK 60
LPAPSWRALS GLLPPDTAIL DFSHNRLSNW NISLESQTLQ EVKMNYNELT EIPYFGEPTS 120
NITLLSLVHN IIPEINAQAL QFYPALESLD LSSNIISEIK TSSFPRMQLK YLNLSNNRIT 180
TLEAGCFDNL SSSLLVVKLN RNRMSMIPPK IFKLPHLQFL ELKRNRIKIV EGLTFQGLDS 240
LRSLKMQRNG ISKLKDGAFF GLNNMEELEL EHNNLTRVNK GWLYGLRMLQ QLYVSQNAIE 300
RISPDAWEFC QRLSELDLSY NQLTRLDESA FVGLSLLERL NLGDNRVTHI ADGVFRFLSN 360
LQTLDLRNNE ISWAIEDASE AFAGLTSLTK LILQGNQIKS ITKKAFIGLE SLEHLDLNNN 420
AIMSIQENAF SQTHLKELIL NTSSLLCDCH LKWLLQWLVD NNFQHSVNVS CAHPEWLAGQ 480
SILNVDLKDF VCDDFLKPQI RTHPETIIAL RGMNVTLTCT AVSSSDSPMS TVWRKDSEIL 540
YDVDTENFVR YWQQAGEALE YTSILHLFNV NFTDEGKYQC IVTNHFGSNY SQKAKLTVNE 600
MPSFLKTPMD LTIRTGAMAR LECAAEGHPA PQISWQKDGG TDFPAARERR MHVMPEDDVF 660
FIANVKIEDM GIYSCMAQNT AGGLSANASL TVLETPSFIR PLEDKTVTRG ETAVLQCIAG 720
GSPAPRLNWT KDDGPLLVTE RHFFAAANQL LIIVDAGLED AGKYTCIMSN TLGTERGHIY 780
LNVISSPNCD SSQSSIGHED DGWTTVGIVI IVVVCCVVGT SLIWVIVIYH MRRKNEDYSI 840
TNTEELNLPA DIPSYLSSQG TLSEPQEGYS NSEAGSHQQL MPPANGYIHK GTDGGTGTRV 900
ICSDCYDNAN IYSRTREYCP YTYIAEEDVL DQTLSSLMVQ MPKETYLVHP PQDTTALESL 960
IPSANREPSA FPTNHERISE KKLPSTQMSG ETLQRPVWNI NRELGLPHPP FSQQPVHESP 1020
QLHQNEGLAG REPDCSASSM SCHRLQDHAF DFSRTRNIQD GSEGT 1065 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. 
Interpro
 IPR000483; Cys-rich_flank_reg_C.
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR013098; Ig_I-set.
 IPR003599; Ig_sub.
 IPR003598; Ig_sub2.
 IPR001611; Leu-rich_rpt.
 IPR003591; Leu-rich_rpt_typical-subtyp. 
Pfam
 PF07679; I-set
 PF00560; LRR_1 
SMART
 SM00409; IG
 SM00408; IGc2
 SM00369; LRR_TYP
 SM00082; LRRCT 
PROSITE
 PS50835; IG_LIKE
 PS51450; LRR 
PRINTS