CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004064
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 5'-AMP-activated protein kinase subunit gamma 
Protein Synonyms/Alias
 AMPK gamma; AMPK subunit gamma; Regulatory protein CAT3; Sucrose non-fermenting protein 4 
Gene Name
 SNF4 
Gene Synonyms/Alias
 CAT3; SCI1; YGL115W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
2******MKPTQDSQEubiquitination[1]
172LTQYRILKFVALNCRubiquitination[1]
276EGVYTCTKNDKLSTIubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Adenine nucleotides-binding subunit gamma of AMP- activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. Gamma non- catalytic subunit mediates binding to AMP, ADP and ATP, leading to activate or inhibit AMPK: AMP-binding results in allosteric activation of alpha catalytic subunit (SNF1) both by inducing phosphorylation and preventing dephosphorylation of catalytic subunits. 
Sequence Annotation
 DOMAIN 37 97 CBS 1.
 DOMAIN 118 181 CBS 2.
 DOMAIN 194 253 CBS 3.
 DOMAIN 262 322 CBS 4.  
Keyword
 3D-structure; ATP-binding; Carbohydrate metabolism; CBS domain; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleotide-binding; Nucleus; Reference proteome; Repeat; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 322 AA 
Protein Sequence
MKPTQDSQEK VSIEQQLAVE SIRKFLNSKT SYDVLPVSYR LIVLDTSLLV KKSLNVLLQN 60
SIVSAPLWDS KTSRFAGLLT TTDFINVIQY YFSNPDKFEL VDKLQLDGLK DIERALGVDQ 120
LDTASIHPSR PLFEACLKML ESRSGRIPLI DQDEETHREI VVSVLTQYRI LKFVALNCRE 180
THFLKIPIGD LNIITQDNMK SCQMTTPVID VIQMLTQGRV SSVPIIDENG YLINVYEAYD 240
VLGLIKGGIY NDLSLSVGEA LMRRSDDFEG VYTCTKNDKL STIMDNIRKA RVHRFFVVDD 300
VGRLVGVLTL SDILKYILLG SN 322 
Gene Ontology
 GO:0031588; C:AMP-activated protein kinase complex; IDA:SGD.
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005641; C:nuclear envelope lumen; IDA:SGD.
 GO:0005886; C:plasma membrane; IDA:SGD.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003824; F:catalytic activity; IEA:InterPro.
 GO:0043539; F:protein serine/threonine kinase activator activity; IMP:SGD.
 GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
 GO:0007031; P:peroxisome organization; IMP:SGD.
 GO:0045722; P:positive regulation of gluconeogenesis; IMP:SGD.
 GO:0006468; P:protein phosphorylation; IMP:SGD.
 GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IGI:SGD.
 GO:0001302; P:replicative cell aging; IMP:SGD.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR000644; Cysta_beta_synth_core. 
Pfam
 PF00571; CBS 
SMART
 SM00116; CBS 
PROSITE
 PS51371; CBS 
PRINTS