CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014023
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Growth hormone-regulated TBC protein 1 
Protein Synonyms/Alias
 TBC1 domain family member 6 
Gene Name
 GRTP1 
Gene Synonyms/Alias
 TBC1D6 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
124RTFPDNVKFRKTTDPubiquitination[1, 2]
323LSMATVAKLRESCRAubiquitination[1, 2, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 May act as a GTPase-activating protein for Rab family protein(s). 
Sequence Annotation
 DOMAIN 68 258 Rab-GAP TBC.  
Keyword
 Alternative splicing; Complete proteome; Direct protein sequencing; GTPase activation; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 336 AA 
Protein Sequence
MQPAERSRVP RIDPYGFERP EDFDDAAYEK FFSSYLVTLT RRAIKWSRLL QGGGVPRSRT 60
VKRYVRKGVP LEHRARVWMV LSGAQAQMDQ NPGYYHQLLQ GERNPRLEDA IRTDLNRTFP 120
DNVKFRKTTD PCLQRTLYNV LLAYGHHNQG VGYCQGMNFI AGYLILITNN EEESFWLLDA 180
LVGRILPDYY SPAMLGLKTD QEVLGELVRA KLPAVGALME RLGVLWTLLV SRWFICLFVD 240
ILPVETVLRI WDCLFNEGSK IIFRVALTLI KQHQELILEA TSVPDICDKF KQITKGSFVM 300
ECHTFMQKIF SEPGSLSMAT VAKLRESCRA RLLAQG 336 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
 GO:0032851; P:positive regulation of Rab GTPase activity; IEA:GOC. 
Interpro
 IPR000195; Rab-GTPase-TBC_dom. 
Pfam
 PF00566; RabGAP-TBC 
SMART
 SM00164; TBC 
PROSITE
 PS50086; TBC_RABGAP 
PRINTS