CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003072
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UPF0042 nucleotide-binding protein YhbJ 
Protein Synonyms/Alias
  
Gene Name
 yhbJ 
Gene Synonyms/Alias
 b3205; JW3172 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
108RLHPLSSKNLSLESAacetylation[1]
118SLESAIDKESDLLEPacetylation[1]
194PNPHWDPKLRPMTGLacetylation[1]
203RPMTGLDKPVAAFLDacetylation[1]
251AIGCTGGKHRSVYIAacetylation[1, 2]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842
Functional Description
 Displays ATPase and GTPase activities. Can also hydrolyze pNPP. May regulate expression of glmS, by affecting the processing and stability of a small RNA, glmZ. 
Sequence Annotation
 NP_BIND 8 15 ATP (Potential).
 NP_BIND 56 59 GTP (Potential).
 MOD_RES 251 251 N6-acetyllysine.  
Keyword
 Acetylation; ATP-binding; Complete proteome; GTP-binding; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 284 AA 
Protein Sequence
MVLMIVSGRS GSGKSVALRA LEDMGFYCVD NLPVVLLPDL ARTLADREIS AAVSIDVRNM 60
PESPEIFEQA MSNLPDAFSP QLLFLDADRN TLIRRYSDTR RLHPLSSKNL SLESAIDKES 120
DLLEPLRSRA DLIVDTSEMS VHELAEMLRT RLLGKREREL TMVFESFGFK HGIPIDADYV 180
FDVRFLPNPH WDPKLRPMTG LDKPVAAFLD RHTEVHNFIY QTRSYLELWL PMLETNNRSY 240
LTVAIGCTGG KHRSVYIAEQ LADYFRSRGK NVQSRHRTLE KRKP 284 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0005525; F:GTP binding; IEA:HAMAP.
 GO:0048518; P:positive regulation of biological process; IMP:EcoCyc.
 GO:0006396; P:RNA processing; IMP:EcoCyc. 
Interpro
 IPR005337; ATPase_P-loop-containing.
 IPR027417; P-loop_NTPase. 
Pfam
 PF03668; ATP_bind_2 
SMART
  
PROSITE
  
PRINTS