CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010223
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Putative ABC transporter periplasmic-binding protein YdcS 
Protein Synonyms/Alias
  
Gene Name
 ydcS 
Gene Synonyms/Alias
 b1440; JW1435 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
52IERGQTDKQYDWVTQacetylation[1]
119TALIPNWKTLDPRVVacetylation[1]
363TPIAEGGKFVPYSRWacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Probably part of the binding-protein-dependent transport system YdcSTUV. 
Sequence Annotation
  
Keyword
 Complete proteome; Periplasm; Reference proteome; Signal; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 381 AA 
Protein Sequence
MSKTFARSSL CALSMTIMTA HAAEPPTNLD KPEGRLDIIA WPGYIERGQT DKQYDWVTQF 60
EKETGCAVNV KTAATSDEMV SLMTKGGYDL VTASGDASLR LIMGKRVQPI NTALIPNWKT 120
LDPRVVKGDW FNVGGKVYGT PYQWGPNLLM YNTKTFPTPP DSWQVVFVEQ NLPDGKSNKG 180
RVQAYDGPIY IADAALFVKA TQPQLGISDP YQLTEEQYQA VLKVLRAQHS LIHRYWHDTT 240
VQMSDFKNEG VVASSAWPYQ ANALKAEGQP VATVFPKEGV TGWADTTMLH SEAKHPVCAY 300
KWMNWSLTPK VQGDVAAWFG SLPVVPEGCK ASPLLGEKGC ETNGFNYFDK IAFWKTPIAE 360
GGKFVPYSRW TQDYIAIMGG R 381 
Gene Ontology
 GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
 GO:0019808; F:polyamine binding; IEA:InterPro.
 GO:0005215; F:transporter activity; IEA:InterPro.
 GO:0015846; P:polyamine transport; IEA:InterPro. 
Interpro
 IPR006059; Solute-bd_1_bac.
 IPR001188; Sperm_putr-bd. 
Pfam
 PF01547; SBP_bac_1 
SMART
  
PROSITE
  
PRINTS
 PR00909; SPERMDNBNDNG.