CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040392
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 D-3-phosphoglycerate dehydrogenase 
Protein Synonyms/Alias
  
Gene Name
 Phgdh 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
30LIVRSATKVTADVINacetylation[1]
30LIVRSATKVTADVINubiquitination[2]
41DVINAAEKLQVVGRAacetylation[3]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 149 AA 
Protein Sequence
XSDRPPITKT EHTGALSFDC EGLIVRSATK VTADVINAAE KLQVVGRAGT GVDNVDLEAA 60
TRKGILVMNT PNGNSLSAAE LTCGMIMCLA RQIPQATASM KDGKWDRKKF MGTELNGKTL 120
GILGLGRIGR EVATRMQSFG MKTVGYDPI 149 
Gene Ontology
 GO:0051287; F:NAD binding; IEA:InterPro.
 GO:0004617; F:phosphoglycerate dehydrogenase activity; TAS:MGI.
 GO:0070314; P:G1 to G0 transition; IMP:MGI.
 GO:0009448; P:gamma-aminobutyric acid metabolic process; IMP:MGI.
 GO:0021782; P:glial cell development; IMP:MGI.
 GO:0006541; P:glutamine metabolic process; IMP:MGI.
 GO:0006544; P:glycine metabolic process; IMP:MGI.
 GO:0006564; P:L-serine biosynthetic process; IEA:InterPro.
 GO:0006563; P:L-serine metabolic process; IMP:MGI.
 GO:0021915; P:neural tube development; IMP:MGI.
 GO:0031175; P:neuron projection development; IMP:MGI.
 GO:0010468; P:regulation of gene expression; IMP:MGI.
 GO:0021510; P:spinal cord development; IMP:MGI.
 GO:0019530; P:taurine metabolic process; IMP:MGI.
 GO:0006566; P:threonine metabolic process; IMP:MGI. 
Interpro
 IPR006236; D-3-Phosphoglycerate_DH.
 IPR006139; D-isomer_2_OHA_DH_cat_dom.
 IPR006140; D-isomer_2_OHA_DH_NAD-bd.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF00389; 2-Hacid_dh
 PF02826; 2-Hacid_dh_C 
SMART
  
PROSITE
 PS00065; D_2_HYDROXYACID_DH_1 
PRINTS