CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009440
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Calmodulin 
Protein Synonyms/Alias
 CaM 
Gene Name
 Calm1; Calm2; Calm3 
Gene Synonyms/Alias
 Calm; Cam; Cam1; Cam2; Camb; Cam3; Camc 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
14EEQIAEFKEAFSLFDacetylation[1]
22EAFSLFDKDGDGTITacetylation[1, 2, 3, 4, 5]
22EAFSLFDKDGDGTITubiquitination[6]
31GDGTITTKELGTVMRacetylation[3]
31GDGTITTKELGTVMRubiquitination[6]
76FLTMMARKMKDTDSEubiquitination[6]
78TMMARKMKDTDSEEEacetylation[1]
78TMMARKMKDTDSEEEubiquitination[6]
95EAFRVFDKDGNGYISacetylation[1, 3, 4, 5]
95EAFRVFDKDGNGYISubiquitination[6]
Reference
 [1] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [2] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [3] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [4] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [5] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [6] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Together with CEP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis (By similarity). 
Sequence Annotation
 DOMAIN 8 43 EF-hand 1.
 DOMAIN 44 79 EF-hand 2.
 DOMAIN 81 116 EF-hand 3.
 DOMAIN 117 149 EF-hand 4.
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 22 22 N6-acetyllysine; alternate (By
 MOD_RES 45 45 Phosphothreonine; by CaMK4 (By
 MOD_RES 95 95 N6-acetyllysine (By similarity).
 MOD_RES 100 100 Phosphotyrosine.
 MOD_RES 102 102 Phosphoserine (By similarity).
 MOD_RES 116 116 N6,N6,N6-trimethyllysine (By similarity).
 MOD_RES 139 139 Phosphotyrosine (By similarity).
 CROSSLNK 22 22 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 3D-structure; Acetylation; Calcium; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Isopeptide bond; Metal-binding; Methylation; Phosphoprotein; Reference proteome; Repeat; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 149 AA 
Protein Sequence
MADQLTEEQI AEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTEAELQ DMINEVDADG 60
NGTIDFPEFL TMMARKMKDT DSEEEIREAF RVFDKDGNGY ISAAELRHVM TNLGEKLTDE 120
EVDEMIREAD IDGDGQVNYE EFVQMMTAK 149 
Gene Ontology
 GO:0005813; C:centrosome; IEA:Compara.
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005876; C:spindle microtubule; IEA:Compara.
 GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0032465; P:regulation of cytokinesis; IEA:Compara.
 GO:0001975; P:response to amphetamine; IEA:Compara.
 GO:0051592; P:response to calcium ion; IEA:Compara.
 GO:0051412; P:response to corticosterone stimulus; IEA:Compara. 
Interpro
 IPR011992; EF-hand-like_dom.
 IPR018247; EF_Hand_1_Ca_BS.
 IPR002048; EF_hand_dom.
 IPR001125; Recoverin. 
Pfam
 PF13499; EF_hand_5 
SMART
 SM00054; EFh 
PROSITE
 PS00018; EF_HAND_1
 PS50222; EF_HAND_2 
PRINTS
 PR00450; RECOVERIN.