CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042776
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nuclear pore complex protein Nup98-Nup96 
Protein Synonyms/Alias
  
Gene Name
 NUP98 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
36IFALLAGKPVWQLSEubiquitination[1, 2, 3]
44PVWQLSEKKQINVCSubiquitination[1, 2, 4]
45VWQLSEKKQINVCSQubiquitination[2, 3]
56VCSQLDWKRSLAIHLubiquitination[2]
128DVCFHLLKLYSDRHYubiquitination[2, 3]
Reference
 [1] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [4] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 232 AA 
Protein Sequence
XVRELLTMQL VDWHQLQADS FIQDERLRIF ALLAGKPVWQ LSEKKQINVC SQLDWKRSLA 60
IHLWYLLPPT ASISRALSMY EEAFQNTSDS DRYACSPLPS YLEGSGCVIA EEQNSQTPLR 120
DVCFHLLKLY SDRHYDLNQL LEPRSITADP LDYRLSWHLW EVLRALNYTH LSAQCEAYVR 180
RLFESCLPGT ASCWRPLNLG LKRLSLPRSS VYLPNGSTRP KLCEHTWNLT ST 232 
Gene Ontology
  
Interpro
 IPR021967; Nup96. 
Pfam
 PF12110; Nup96 
SMART
  
PROSITE
  
PRINTS