CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023600
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 HIG1 domain family member 1A, mitochondrial 
Protein Synonyms/Alias
 Hypoxia-inducible gene 1 protein; RCF1 homolog A; RCF1a 
Gene Name
 HIGD1A 
Gene Synonyms/Alias
 HIG1; HSPC010 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
33YEEDQGSKLIRKAKEubiquitination[1, 2]
104MYREFWAKPKP****ubiquitination[2]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Proposed subunit of cytochrome c oxidase (COX, complex IV), which is the terminal component of the mitochondrial respiratory chain that catalyzes the reduction of oxygen to water. May play a role in the assembly of respiratory supercomplexes. 
Sequence Annotation
 DOMAIN 1 93 HIG1.
 MOD_RES 2 2 N-acetylserine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Electron transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Reference proteome; Respiratory chain; Stress response; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 93 AA 
Protein Sequence
MEQKLVEEIL QAITMSTDTG VSLPSYEEDQ GSKLIRKAKE APFVPVGIAG FAAIVAYGLY 60
KLKSRGNTKM SIHLIHMRVA AQGFVVGAMT VGMGYSMYRE FWAKPKP 107 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
 GO:0043234; C:protein complex; IDA:LIFEdb.
 GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0043066; P:negative regulation of apoptotic process; IDA:MGI.
 GO:0006950; P:response to stress; IEA:UniProtKB-KW. 
Interpro
 IPR007667; Hypoxia_induced_domain. 
Pfam
 PF04588; HIG_1_N 
SMART
  
PROSITE
 PS51503; HIG1 
PRINTS