CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021204
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Caseinolytic peptidase B protein homolog 
Protein Synonyms/Alias
 Suppressor of potassium transport defect 3 
Gene Name
 CLPB 
Gene Synonyms/Alias
 HSP78; SKD3 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
163EGADVNAKHRLGWTAubiquitination[1]
283AREGEVMKLLRTSEAubiquitination[1]
411EEGGQLTKKLKQCPNubiquitination[1]
412EGGQLTKKLKQCPNAubiquitination[1]
559KELNFWAKRAKQRHNubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 May function as a regulatory ATPase and be related to secretion/protein trafficking process. 
Sequence Annotation
 REPEAT 133 162 ANK 1.
 REPEAT 166 195 ANK 2.
 REPEAT 265 295 ANK 3.
 REPEAT 298 327 ANK 4.
 NP_BIND 381 388 ATP (Potential).
 MOD_RES 589 589 N6-acetyllysine.  
Keyword
 Acetylation; Alternative splicing; ANK repeat; ATP-binding; Complete proteome; Nucleotide-binding; Polymorphism; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 707 AA 
Protein Sequence
MLGSLVLRRK ALAPRLLLRL LRSPTLRGHG GASGRNVTTG SLGEPQWLRV ATGGRPGTSP 60
ALFSGRGAAT GGRQGGRFDT KCLAAATWGR LPGPEETLPG QDSWNGVPSR AGLGMCALAA 120
ALVVHCYSKS PSNKDAALLE AARANNMQEV SRLLSEGADV NAKHRLGWTA LMVAAINRNN 180
SVVQVLLAAG ADPNLGDDFS SVYKTAKEQG IHSLEVLITR EDDFNNRLNN RASFKGCTAL 240
HYAVLADDYR TVKELLDGGA NPLQRNEMGH TPLDYAREGE VMKLLRTSEA KYQEKQRKRE 300
AEERRRFPLE QRLKEHIIGQ ESAIATVGAA IRRKENGWYD EEHPLVFLFL GSSGIGKTEL 360
AKQTAKYMHK DAKKGFIRLD MSEFQERHEV AKFIGSPPGY VGHEEGGQLT KKLKQCPNAV 420
VLFDEVDKAH PDVLTIMLQL FDEGRLTDGK GKTIDCKDAI FIMTSNVASD EIAQHALQLR 480
QEALEMSRNR IAENLGDVQI SDKITISKNF KENVIRPILK AHFRRDEFLG RINEIVYFLP 540
FCHSELIQLV NKELNFWAKR AKQRHNITLL WDREVADVLV DGYNVHYGAR SIKHEVERRV 600
VNQLAAAYEQ DLLPGGCTLR ITVEDSDKQL LKSPELPSPQ AEKRLPKLRL EIIDKDSKTR 660
RLDIRAPLHP EKVCNTI 677 
Gene Ontology
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
 GO:0034605; P:cellular response to heat; IDA:UniProtKB. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR002110; Ankyrin_rpt.
 IPR020683; Ankyrin_rpt-contain_dom.
 IPR013093; ATPase_AAA-2.
 IPR001270; Chaprnin_ClpA/B.
 IPR019489; Clp_ATPase_C.
 IPR027417; P-loop_NTPase. 
Pfam
 PF07724; AAA_2
 PF12796; Ank_2
 PF10431; ClpB_D2-small 
SMART
 SM00382; AAA
 SM00248; ANK
 SM01086; ClpB_D2-small 
PROSITE
 PS50297; ANK_REP_REGION
 PS50088; ANK_REPEAT 
PRINTS
 PR00300; CLPPROTEASEA.