CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034960
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Smarcc1 
Protein Synonyms/Alias
 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 (Predicted), isoform CRA_b 
Gene Name
 Smarcc1 
Gene Synonyms/Alias
 Smarcc1_predicted; rCG_25534 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
358YGKRRNQKDEDEQEDacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1078 AA 
Protein Sequence
MATTAGGGPG AAAGAVGAGG AAAASGLAVY RRKDGGPASK FWESPDTVSQ LDSVRVWLGK 60
HYKKYVHADA PTNKTLAGLV VQLLQFQEDA FGKHVTNPAF TKLPAKCFMD FKAGGTLCHI 120
LGAAYKYKNE QGWRRFDLQN PSRMDRNVEM FMNIEKTLVQ NNCLTRPNIY LIPDIDLKLA 180
NKLKDIIKRH QGTFTDEKSK ASHHIYPYPS SQEDEEWLRP VMRRDKQVLV HWGFYPDSYD 240
TWVHSNDVDA EIEDAPIPEK PWKVHVKWIL DTDVFNEWMN EEDYEVDENR KPVSFRQRIS 300
TKNEEPVRSP ERRERKASAN ARKRKHSPSP PPPTATESRK KSGKKGQASL YGKRRNQKDE 360
DEQEDLTKDM EDPTPVPNIE EVLLPKNVNP KKDSENTPVK GGTVADLDEQ DEEAVTTGGK 420
EDEDPSKGDP SRSADAGEDN VTEQTNHIII PSYASWFDYN CIHVIERRAL PEFFNGKNKS 480
KTPEIYLAYR NFMIDTYRLN PQEYLTSTAC RRNLTGDVCA VMRVHAFLEQ WGLVNYQVDP 540
ESRPMAMGPP PTPHFNVLAD TPSGLVPLHL RSPQVPAAQQ MLNFPEKNKE KPIDLQNFGL 600
RTDIYSKKTL AKSKGASAGR EWTEQETLLL LEALEMYKDD WNKVSEHVGS RTQDECILHF 660
LRLPIEDPYL ENSDASLGPL AYQPVPFSQS GNPVMSTVAF LASVVDPRVA SAAAKAALEE 720
FSRVREEVPL ELVEAHVKKV QEAARASGKV DPTYGLESSC IAGTGPDEPE KLEGSEEEKM 780
ETDPDGQQPE KAENKGENES DEGDKIQDGE NEKNSEKERD SDTSEDVKPE EKENEENKEL 840
TDTCKERESD TGKKKVEHEI SEGNVATAAA AALASAATKA KHLAAVEERK IKSLVALLVE 900
TQMKKLEIKL RHFEELETIM DREKEALEQQ RQQLLTERQN FHMEQLKYAE LRARQQMEQQ 960
QHGQPPQQAH QHPGGPGLAP LGAAGHPGMM PHQQPPPYPM MHHQMPPPHP PQPGQIPGPG 1020
SMMPGQPMPG RMIPTVAANI HPTGSGPTPP GMPPMPGNIL GPRVPLTAPN GMWLHQRL 1078 
Gene Ontology
 GO:0071565; C:nBAF complex; IEA:Compara.
 GO:0071564; C:npBAF complex; IEA:Compara.
 GO:0016514; C:SWI/SNF complex; IEA:Compara.
 GO:0071778; C:WINAC complex; IEA:Compara.
 GO:0001741; C:XY body; IEA:Compara.
 GO:0003682; F:chromatin binding; IEA:Compara.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0006338; P:chromatin remodeling; IEA:Compara.
 GO:0008286; P:insulin receptor signaling pathway; IEA:Compara.
 GO:0006337; P:nucleosome disassembly; IEA:Compara.
 GO:0009887; P:organ morphogenesis; IEA:Compara.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Compara. 
Interpro
 IPR001357; BRCT_dom.
 IPR000953; Chromo_domain/shadow.
 IPR009057; Homeodomain-like.
 IPR001005; SANT/Myb.
 IPR017884; SANT_dom.
 IPR007526; SWIRM.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00249; Myb_DNA-binding
 PF04433; SWIRM 
SMART
 SM00298; CHROMO
 SM00717; SANT 
PROSITE
 PS51293; SANT
 PS50934; SWIRM 
PRINTS