CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-036357
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 General transcription factor IIH subunit 2-like protein 
Protein Synonyms/Alias
  
Gene Name
 GTF2H2C 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
99TKSKRAEKLTELSGNubiquitination[1, 2, 3]
212ILDESHYKELLTHHLubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 253 AA 
Protein Sequence
MDEEPERTKR WEGGYERTWE ILKEDESGSL KATIEDILFK AKRKRVFEHH GQVRLGMMRH 60
LYVVVDGSRT MEDQDLKPNR LTCTLKIGII VTKSKRAEKL TELSGNPRKH ITSLKEAVDM 120
TCHGEPSLYN SLSMAMQTLK HMPGHTSREV LIIFSSLTTC DPSNIYDLIK TLKAAKIRVS 180
VIGLSAEVRV CTVLARETGG TYHVILDESH YKELLTHHLS PPPASSSSEC SLIRMGFPQH 240
TIASLSDQDA KPS 253 
Gene Ontology
 GO:0000439; C:core TFIIH complex; IEA:InterPro.
 GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR007198; Ssl1-like.
 IPR012170; TFIIH_SSL1/p44.
 IPR002035; VWF_A. 
Pfam
 PF04056; Ssl1 
SMART
 SM00327; VWA 
PROSITE
  
PRINTS